Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1BO75841 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1BO75841 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1BO75841 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1BO75841 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
UPK1BO75841 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK1BO75841 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.52■□□□□ 0.24
UPK1BO75841 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UPK1BO75841 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.52■□□□□ 0.23
UPK1BO75841 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.52■□□□□ 0.23
UPK1BO75841 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.52■□□□□ 0.23
UPK1BO75841 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.52■□□□□ 0.23
UPK1BO75841 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK1BO75841 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
UPK1BO75841 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1BO75841 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1BO75841 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UPK1BO75841 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
UPK1BO75841 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
UPK1BO75841 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1BO75841 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.51■□□□□ 0.23
UPK1BO75841 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.51■□□□□ 0.23
UPK1BO75841 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1BO75841 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK1BO75841 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
UPK1BO75841 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK1BO75841 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.51■□□□□ 0.23
UPK1BO75841 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 FEM1AP3-201ENST00000403722 1741 ntBASIC16.5■□□□□ 0.23
UPK1BO75841 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK1BO75841 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK1BO75841 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UPK1BO75841 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.5■□□□□ 0.23
UPK1BO75841 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK1BO75841 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK1BO75841 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.5■□□□□ 0.23
UPK1BO75841 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
UPK1BO75841 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK1BO75841 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 AC105233.4-201ENST00000642045 216 ntBASIC16.5■□□□□ 0.23
UPK1BO75841 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.5■□□□□ 0.23
UPK1BO75841 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UPK1BO75841 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK1BO75841 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
UPK1BO75841 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.49■□□□□ 0.23
UPK1BO75841 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UPK1BO75841 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.49■□□□□ 0.23
UPK1BO75841 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UPK1BO75841 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms