Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.98■□□□□ 0.63
GPC4O75487 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GPC4O75487 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC4O75487 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.98■□□□□ 0.63
GPC4O75487 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.97■□□□□ 0.63
GPC4O75487 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GPC4O75487 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.97■□□□□ 0.63
GPC4O75487 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.97■□□□□ 0.63
GPC4O75487 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GPC4O75487 AL353807.1-201ENST00000427475 662 ntBASIC18.97■□□□□ 0.63
GPC4O75487 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.97■□□□□ 0.63
GPC4O75487 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GPC4O75487 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
GPC4O75487 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.97■□□□□ 0.63
GPC4O75487 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.97■□□□□ 0.63
GPC4O75487 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
GPC4O75487 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.97■□□□□ 0.63
GPC4O75487 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC4O75487 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
GPC4O75487 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
GPC4O75487 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
GPC4O75487 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
GPC4O75487 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC4O75487 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.96■□□□□ 0.63
GPC4O75487 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.96■□□□□ 0.63
GPC4O75487 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC4O75487 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.96■□□□□ 0.63
GPC4O75487 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC4O75487 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.96■□□□□ 0.63
GPC4O75487 AF186192.3-201ENST00000583427 947 ntBASIC18.96■□□□□ 0.63
GPC4O75487 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.96■□□□□ 0.63
GPC4O75487 AL445675.2-201ENST00000620291 557 ntBASIC18.96■□□□□ 0.63
GPC4O75487 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC4O75487 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.96■□□□□ 0.63
GPC4O75487 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.96■□□□□ 0.63
GPC4O75487 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.96■□□□□ 0.63
GPC4O75487 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GPC4O75487 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
GPC4O75487 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
GPC4O75487 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.95■□□□□ 0.62
GPC4O75487 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.95■□□□□ 0.62
GPC4O75487 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
GPC4O75487 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.95■□□□□ 0.62
GPC4O75487 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.95■□□□□ 0.62
GPC4O75487 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
GPC4O75487 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
GPC4O75487 SDHAP1-207ENST00000440850 2000 ntBASIC18.95■□□□□ 0.62
GPC4O75487 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.94■□□□□ 0.62
GPC4O75487 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC4O75487 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC4O75487 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC4O75487 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC4O75487 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GPC4O75487 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.94■□□□□ 0.62
GPC4O75487 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GPC4O75487 AL135905.2-201ENST00000584934 1404 ntBASIC18.94■□□□□ 0.62
GPC4O75487 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC4O75487 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.94■□□□□ 0.62
GPC4O75487 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.94■□□□□ 0.62
GPC4O75487 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.94■□□□□ 0.62
GPC4O75487 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GPC4O75487 KSR1P1-201ENST00000446298 240 ntBASIC18.94■□□□□ 0.62
GPC4O75487 RPS2P4-201ENST00000476944 856 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms