Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
PMPCBO75439 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMPCBO75439 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PMPCBO75439 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PMPCBO75439 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PMPCBO75439 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PMPCBO75439 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PMPCBO75439 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PMPCBO75439 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PMPCBO75439 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.23■□□□□ 0.67
PMPCBO75439 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.23■□□□□ 0.67
PMPCBO75439 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.23■□□□□ 0.67
PMPCBO75439 AC116562.2-201ENST00000507042 360 ntBASIC19.23■□□□□ 0.67
PMPCBO75439 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.23■□□□□ 0.67
PMPCBO75439 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.23■□□□□ 0.67
PMPCBO75439 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.23■□□□□ 0.67
PMPCBO75439 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PMPCBO75439 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PMPCBO75439 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PMPCBO75439 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.22■□□□□ 0.67
PMPCBO75439 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.22■□□□□ 0.67
PMPCBO75439 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PMPCBO75439 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PMPCBO75439 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PMPCBO75439 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PMPCBO75439 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PMPCBO75439 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.22■□□□□ 0.67
PMPCBO75439 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.22■□□□□ 0.67
PMPCBO75439 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.22■□□□□ 0.67
PMPCBO75439 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.22■□□□□ 0.67
PMPCBO75439 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PMPCBO75439 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.22■□□□□ 0.67
PMPCBO75439 AP000692.2-201ENST00000608391 879 ntBASIC19.22■□□□□ 0.67
PMPCBO75439 REXO1L10P-201ENST00000615707 1290 ntBASIC19.22■□□□□ 0.67
PMPCBO75439 REXO1L12P-201ENST00000622156 912 ntBASIC19.22■□□□□ 0.67
PMPCBO75439 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PMPCBO75439 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PMPCBO75439 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PMPCBO75439 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PMPCBO75439 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PMPCBO75439 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
PMPCBO75439 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.21■□□□□ 0.67
PMPCBO75439 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.21■□□□□ 0.67
PMPCBO75439 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.21■□□□□ 0.67
PMPCBO75439 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.21■□□□□ 0.67
PMPCBO75439 AP003071.4-201ENST00000562276 1284 ntBASIC19.21■□□□□ 0.67
PMPCBO75439 CKBP1-201ENST00000565489 1086 ntBASIC19.21■□□□□ 0.67
PMPCBO75439 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.21■□□□□ 0.67
PMPCBO75439 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PMPCBO75439 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PMPCBO75439 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.21■□□□□ 0.67
PMPCBO75439 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PMPCBO75439 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PMPCBO75439 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PMPCBO75439 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
PMPCBO75439 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMPCBO75439 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
PMPCBO75439 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PMPCBO75439 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PMPCBO75439 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
PMPCBO75439 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMPCBO75439 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PMPCBO75439 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PMPCBO75439 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms