Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT3O75175 FZD10-202ENST00000539839 3282 ntBASIC18.33■□□□□ 0.53
CNOT3O75175 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.33■□□□□ 0.53
CNOT3O75175 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
CNOT3O75175 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT3O75175 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.33■□□□□ 0.52
CNOT3O75175 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT3O75175 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.33■□□□□ 0.52
CNOT3O75175 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CNOT3O75175 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.33■□□□□ 0.52
CNOT3O75175 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.33■□□□□ 0.52
CNOT3O75175 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.33■□□□□ 0.52
CNOT3O75175 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT3O75175 AC010947.1-201ENST00000623454 693 ntBASIC18.33■□□□□ 0.52
CNOT3O75175 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CNOT3O75175 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT3O75175 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT3O75175 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.33■□□□□ 0.52
CNOT3O75175 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT3O75175 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CNOT3O75175 NOC2LP1-202ENST00000452600 2235 ntBASIC18.33■□□□□ 0.52
CNOT3O75175 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.33■□□□□ 0.52
CNOT3O75175 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CNOT3O75175 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CNOT3O75175 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CNOT3O75175 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CNOT3O75175 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CNOT3O75175 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.32■□□□□ 0.52
CNOT3O75175 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.32■□□□□ 0.52
CNOT3O75175 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT3O75175 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT3O75175 AC008040.2-201ENST00000461049 708 ntBASIC18.32■□□□□ 0.52
CNOT3O75175 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT3O75175 AC145285.6-201ENST00000604632 637 ntBASIC18.32■□□□□ 0.52
CNOT3O75175 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.32■□□□□ 0.52
CNOT3O75175 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.32■□□□□ 0.52
CNOT3O75175 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CNOT3O75175 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.32■□□□□ 0.52
CNOT3O75175 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CNOT3O75175 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT3O75175 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT3O75175 FSCN1P1-201ENST00000568912 1481 ntBASIC18.32■□□□□ 0.52
CNOT3O75175 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT3O75175 AC005332.7-201ENST00000614046 2005 ntBASIC18.32■□□□□ 0.52
CNOT3O75175 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CNOT3O75175 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CNOT3O75175 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CNOT3O75175 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.32■□□□□ 0.52
CNOT3O75175 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CNOT3O75175 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT3O75175 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNOT3O75175 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT3O75175 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT3O75175 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.31■□□□□ 0.52
CNOT3O75175 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CNOT3O75175 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT3O75175 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.31■□□□□ 0.52
CNOT3O75175 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.31■□□□□ 0.52
CNOT3O75175 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNOT3O75175 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.31■□□□□ 0.52
CNOT3O75175 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT3O75175 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT3O75175 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms