Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
SSSCA1O60232 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.45■□□□□ 0.06
SSSCA1O60232 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.45■□□□□ 0.06
SSSCA1O60232 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SSSCA1O60232 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.45■□□□□ 0.06
SSSCA1O60232 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.45■□□□□ 0.06
SSSCA1O60232 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.45■□□□□ 0.06
SSSCA1O60232 AC069236.1-201ENST00000604339 616 ntBASIC15.45■□□□□ 0.06
SSSCA1O60232 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.45■□□□□ 0.06
SSSCA1O60232 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SSSCA1O60232 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.44■□□□□ 0.06
SSSCA1O60232 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.44■□□□□ 0.06
SSSCA1O60232 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SSSCA1O60232 AC068338.2-201ENST00000563278 1430 ntBASIC15.44■□□□□ 0.06
SSSCA1O60232 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SSSCA1O60232 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SSSCA1O60232 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.44■□□□□ 0.06
SSSCA1O60232 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 FEM1AP3-201ENST00000403722 1741 ntBASIC15.44■□□□□ 0.06
SSSCA1O60232 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.44■□□□□ 0.06
SSSCA1O60232 AC008694.1-202ENST00000636953 945 ntBASIC15.44■□□□□ 0.06
SSSCA1O60232 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
SSSCA1O60232 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
SSSCA1O60232 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SSSCA1O60232 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SSSCA1O60232 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
SSSCA1O60232 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.43■□□□□ 0.06
SSSCA1O60232 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SSSCA1O60232 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.43■□□□□ 0.06
SSSCA1O60232 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.43■□□□□ 0.06
SSSCA1O60232 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.43■□□□□ 0.06
SSSCA1O60232 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SSSCA1O60232 CYP2T1P-201ENST00000432607 1285 ntBASIC15.43■□□□□ 0.06
SSSCA1O60232 KRT18P11-201ENST00000435214 1283 ntBASIC15.43■□□□□ 0.06
SSSCA1O60232 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.43■□□□□ 0.06
SSSCA1O60232 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.43■□□□□ 0.06
SSSCA1O60232 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.43■□□□□ 0.06
SSSCA1O60232 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SSSCA1O60232 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.43■□□□□ 0.06
SSSCA1O60232 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.43■□□□□ 0.06
SSSCA1O60232 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.43■□□□□ 0.06
SSSCA1O60232 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SSSCA1O60232 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.43■□□□□ 0.06
SSSCA1O60232 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.43■□□□□ 0.06
SSSCA1O60232 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SSSCA1O60232 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 AC126763.1-201ENST00000552015 2118 ntBASIC15.43■□□□□ 0.06
SSSCA1O60232 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SSSCA1O60232 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.43■□□□□ 0.06
SSSCA1O60232 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.43■□□□□ 0.06
SSSCA1O60232 MKRN4P-201ENST00000444706 1521 ntBASIC15.43■□□□□ 0.06
SSSCA1O60232 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.42■□□□□ 0.06
SSSCA1O60232 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SSSCA1O60232 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SSSCA1O60232 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.42■□□□□ 0.06
SSSCA1O60232 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms