Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCL13O43927 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.95■□□□□ 0.3
CXCL13O43927 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.95■□□□□ 0.3
CXCL13O43927 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.95■□□□□ 0.3
CXCL13O43927 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCL13O43927 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCL13O43927 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CXCL13O43927 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCL13O43927 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CXCL13O43927 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.95■□□□□ 0.3
CXCL13O43927 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CXCL13O43927 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.94■□□□□ 0.3
CXCL13O43927 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CXCL13O43927 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.94■□□□□ 0.3
CXCL13O43927 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CXCL13O43927 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CXCL13O43927 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.94■□□□□ 0.3
CXCL13O43927 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 AC005521.1-201ENST00000393351 872 ntBASIC16.94■□□□□ 0.3
CXCL13O43927 HMGA1P5-201ENST00000412453 271 ntBASIC16.94■□□□□ 0.3
CXCL13O43927 AC113347.1-201ENST00000413321 391 ntBASIC16.94■□□□□ 0.3
CXCL13O43927 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.94■□□□□ 0.3
CXCL13O43927 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 KRT18P21-201ENST00000515767 1272 ntBASIC16.94■□□□□ 0.3
CXCL13O43927 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.94■□□□□ 0.3
CXCL13O43927 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.94■□□□□ 0.3
CXCL13O43927 AC008622.2-201ENST00000617006 1229 ntBASIC16.94■□□□□ 0.3
CXCL13O43927 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
CXCL13O43927 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CXCL13O43927 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
CXCL13O43927 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 KRT8P3-201ENST00000519669 1449 ntBASIC16.94■□□□□ 0.3
CXCL13O43927 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CXCL13O43927 AL161938.1-201ENST00000569833 2180 ntBASIC16.94■□□□□ 0.3
CXCL13O43927 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CXCL13O43927 LIN28AP1-201ENST00000429574 405 ntBASIC16.93■□□□□ 0.3
CXCL13O43927 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 AL137013.1-201ENST00000432946 1228 ntBASIC16.93■□□□□ 0.3
CXCL13O43927 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.93■□□□□ 0.3
CXCL13O43927 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
CXCL13O43927 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.93■□□□□ 0.3
CXCL13O43927 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.93■□□□□ 0.3
CXCL13O43927 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CXCL13O43927 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.93■□□□□ 0.3
CXCL13O43927 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.93■□□□□ 0.3
CXCL13O43927 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CXCL13O43927 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CXCL13O43927 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.92■□□□□ 0.3
CXCL13O43927 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCL13O43927 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.92■□□□□ 0.3
CXCL13O43927 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.92■□□□□ 0.3
CXCL13O43927 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms