Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.94■□□□□ 0.62
LDB2O43679 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.94■□□□□ 0.62
LDB2O43679 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.94■□□□□ 0.62
LDB2O43679 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.94■□□□□ 0.62
LDB2O43679 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LDB2O43679 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.93■□□□□ 0.62
LDB2O43679 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LDB2O43679 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
LDB2O43679 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LDB2O43679 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.93■□□□□ 0.62
LDB2O43679 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.93■□□□□ 0.62
LDB2O43679 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.93■□□□□ 0.62
LDB2O43679 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LDB2O43679 MFAP1P1-201ENST00000442257 1255 ntBASIC18.93■□□□□ 0.62
LDB2O43679 SNORA78-201ENST00000459373 127 ntBASIC18.93■□□□□ 0.62
LDB2O43679 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
LDB2O43679 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 Z98044.1-201ENST00000632503 1764 ntBASIC18.93■□□□□ 0.62
LDB2O43679 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LDB2O43679 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.93■□□□□ 0.62
LDB2O43679 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.93■□□□□ 0.62
LDB2O43679 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LDB2O43679 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB2O43679 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
LDB2O43679 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 KRT8P32-201ENST00000512863 1461 ntBASIC18.92■□□□□ 0.62
LDB2O43679 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB2O43679 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
LDB2O43679 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB2O43679 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LDB2O43679 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.92■□□□□ 0.62
LDB2O43679 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.92■□□□□ 0.62
LDB2O43679 MIR4785-201ENST00000585005 73 ntBASIC18.92■□□□□ 0.62
LDB2O43679 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
LDB2O43679 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.92■□□□□ 0.62
LDB2O43679 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.92■□□□□ 0.62
LDB2O43679 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.92■□□□□ 0.62
LDB2O43679 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LDB2O43679 HEIH-201ENST00000623091 1652 ntBASIC18.92■□□□□ 0.62
LDB2O43679 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.91■□□□□ 0.62
LDB2O43679 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB2O43679 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB2O43679 RBM17P1-201ENST00000453646 1190 ntBASIC18.91■□□□□ 0.62
LDB2O43679 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.91■□□□□ 0.62
LDB2O43679 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.91■□□□□ 0.62
LDB2O43679 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB2O43679 AC068587.9-201ENST00000641814 219 ntBASIC18.91■□□□□ 0.62
LDB2O43679 AC120498.9-201ENST00000339021 3867 ntBASIC18.91■□□□□ 0.62
LDB2O43679 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LDB2O43679 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LDB2O43679 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.91■□□□□ 0.62
LDB2O43679 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LDB2O43679 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LDB2O43679 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.91■□□□□ 0.62
LDB2O43679 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LDB2O43679 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB2O43679 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.9■□□□□ 0.62
LDB2O43679 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LDB2O43679 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.9■□□□□ 0.62
LDB2O43679 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.9■□□□□ 0.62
LDB2O43679 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.9■□□□□ 0.62
LDB2O43679 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms