Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF13O43567 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF13O43567 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RNF13O43567 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
RNF13O43567 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
RNF13O43567 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF13O43567 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF13O43567 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF13O43567 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF13O43567 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF13O43567 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF13O43567 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RNF13O43567 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF13O43567 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF13O43567 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF13O43567 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF13O43567 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF13O43567 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF13O43567 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF13O43567 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF13O43567 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF13O43567 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF13O43567 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF13O43567 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF13O43567 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 AL390961.4-201ENST00000623958 2535 ntBASIC17.24■□□□□ 0.35
RNF13O43567 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
RNF13O43567 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF13O43567 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF13O43567 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF13O43567 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RNF13O43567 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF13O43567 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 KRT16P5-201ENST00000455284 522 ntBASIC17.23■□□□□ 0.35
RNF13O43567 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF13O43567 AL160286.2-201ENST00000567150 934 ntBASIC17.23■□□□□ 0.35
RNF13O43567 RN7SL471P-201ENST00000580476 299 ntBASIC17.23■□□□□ 0.35
RNF13O43567 AC110285.5-201ENST00000611501 352 ntBASIC17.23■□□□□ 0.35
RNF13O43567 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF13O43567 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF13O43567 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF13O43567 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.22■□□□□ 0.35
RNF13O43567 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
RNF13O43567 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RNF13O43567 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF13O43567 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF13O43567 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF13O43567 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.22■□□□□ 0.35
RNF13O43567 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.22■□□□□ 0.35
RNF13O43567 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms