Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.99■□□□□ 0.47
PROM1O43490 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PROM1O43490 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
PROM1O43490 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
PROM1O43490 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PROM1O43490 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.98■□□□□ 0.47
PROM1O43490 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PROM1O43490 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.98■□□□□ 0.47
PROM1O43490 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PROM1O43490 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PROM1O43490 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.98■□□□□ 0.47
PROM1O43490 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.98■□□□□ 0.47
PROM1O43490 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.98■□□□□ 0.47
PROM1O43490 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.98■□□□□ 0.47
PROM1O43490 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.98■□□□□ 0.47
PROM1O43490 REXO1L10P-201ENST00000615707 1290 ntBASIC17.98■□□□□ 0.47
PROM1O43490 REXO1L12P-201ENST00000622156 912 ntBASIC17.98■□□□□ 0.47
PROM1O43490 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.98■□□□□ 0.47
PROM1O43490 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.98■□□□□ 0.47
PROM1O43490 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.98■□□□□ 0.47
PROM1O43490 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PROM1O43490 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.97■□□□□ 0.47
PROM1O43490 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
PROM1O43490 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.97■□□□□ 0.47
PROM1O43490 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PROM1O43490 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PROM1O43490 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
PROM1O43490 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PROM1O43490 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 TSPY7P-201ENST00000431358 1114 ntBASIC17.97■□□□□ 0.47
PROM1O43490 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.97■□□□□ 0.47
PROM1O43490 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.97■□□□□ 0.47
PROM1O43490 AP003071.4-201ENST00000562276 1284 ntBASIC17.97■□□□□ 0.47
PROM1O43490 CKBP1-201ENST00000565489 1086 ntBASIC17.97■□□□□ 0.47
PROM1O43490 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.97■□□□□ 0.47
PROM1O43490 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.97■□□□□ 0.47
PROM1O43490 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
PROM1O43490 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.97■□□□□ 0.47
PROM1O43490 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PROM1O43490 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PROM1O43490 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PROM1O43490 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.97■□□□□ 0.47
PROM1O43490 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PROM1O43490 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PROM1O43490 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
PROM1O43490 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.96■□□□□ 0.47
PROM1O43490 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.96■□□□□ 0.47
PROM1O43490 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.96■□□□□ 0.47
PROM1O43490 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.96■□□□□ 0.47
PROM1O43490 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PROM1O43490 DGCR10-201ENST00000609839 495 ntBASIC17.96■□□□□ 0.47
PROM1O43490 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.96■□□□□ 0.47
PROM1O43490 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PROM1O43490 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PROM1O43490 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
PROM1O43490 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.96■□□□□ 0.46
PROM1O43490 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PROM1O43490 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.95■□□□□ 0.46
PROM1O43490 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PROM1O43490 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PROM1O43490 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PROM1O43490 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.95■□□□□ 0.46
PROM1O43490 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PROM1O43490 AC004408.2-201ENST00000623613 2777 ntBASIC17.95■□□□□ 0.46
PROM1O43490 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PROM1O43490 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.95■□□□□ 0.46
PROM1O43490 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms