Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 KRT17P2-201ENST00000300992 1314 ntBASIC17.2■□□□□ 0.34
SMAD9O15198 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMAD9O15198 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SMAD9O15198 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SMAD9O15198 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 FSCN1P1-201ENST00000568912 1481 ntBASIC17.19■□□□□ 0.34
SMAD9O15198 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SMAD9O15198 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.19■□□□□ 0.34
SMAD9O15198 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SMAD9O15198 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.19■□□□□ 0.34
SMAD9O15198 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 AC004951.3-201ENST00000418645 1148 ntBASIC17.19■□□□□ 0.34
SMAD9O15198 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.19■□□□□ 0.34
SMAD9O15198 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SMAD9O15198 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.19■□□□□ 0.34
SMAD9O15198 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.19■□□□□ 0.34
SMAD9O15198 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SMAD9O15198 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMAD9O15198 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.18■□□□□ 0.34
SMAD9O15198 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD9O15198 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SMAD9O15198 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.18■□□□□ 0.34
SMAD9O15198 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD9O15198 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SMAD9O15198 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD9O15198 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.18■□□□□ 0.34
SMAD9O15198 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.18■□□□□ 0.34
SMAD9O15198 AC091390.4-202ENST00000476426 537 ntBASIC17.18■□□□□ 0.34
SMAD9O15198 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SMAD9O15198 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.18■□□□□ 0.34
SMAD9O15198 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.18■□□□□ 0.34
SMAD9O15198 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD9O15198 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.18■□□□□ 0.34
SMAD9O15198 AC011298.2-201ENST00000617989 482 ntBASIC17.18■□□□□ 0.34
SMAD9O15198 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SMAD9O15198 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD9O15198 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD9O15198 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SMAD9O15198 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SMAD9O15198 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD9O15198 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.18■□□□□ 0.34
SMAD9O15198 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMAD9O15198 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD9O15198 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SMAD9O15198 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
SMAD9O15198 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD9O15198 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.17■□□□□ 0.34
SMAD9O15198 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.17■□□□□ 0.34
SMAD9O15198 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD9O15198 AC008040.2-201ENST00000461049 708 ntBASIC17.17■□□□□ 0.34
SMAD9O15198 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD9O15198 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.17■□□□□ 0.34
SMAD9O15198 AL355075.4-201ENST00000554988 638 ntBASIC17.17■□□□□ 0.34
SMAD9O15198 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.17■□□□□ 0.34
SMAD9O15198 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.17■□□□□ 0.34
SMAD9O15198 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.17■□□□□ 0.34
SMAD9O15198 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SMAD9O15198 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms