Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NPC1O15118 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1O15118 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1O15118 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1O15118 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1O15118 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.11■□□□□ 0.65
NPC1O15118 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.11■□□□□ 0.65
NPC1O15118 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.11■□□□□ 0.65
NPC1O15118 AC083849.1-201ENST00000615227 514 ntBASIC19.11■□□□□ 0.65
NPC1O15118 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.11■□□□□ 0.65
NPC1O15118 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NPC1O15118 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NPC1O15118 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1O15118 AL158211.5-201ENST00000623583 2518 ntBASIC19.11■□□□□ 0.65
NPC1O15118 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1O15118 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NPC1O15118 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.1■□□□□ 0.65
NPC1O15118 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.1■□□□□ 0.65
NPC1O15118 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.1■□□□□ 0.65
NPC1O15118 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 KRT8P7-201ENST00000533003 1432 ntBASIC19.1■□□□□ 0.65
NPC1O15118 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.1■□□□□ 0.65
NPC1O15118 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NPC1O15118 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
NPC1O15118 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NPC1O15118 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.1■□□□□ 0.65
NPC1O15118 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NPC1O15118 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.1■□□□□ 0.65
NPC1O15118 RASA4DP-201ENST00000460726 1199 ntBASIC19.1■□□□□ 0.65
NPC1O15118 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.1■□□□□ 0.65
NPC1O15118 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.1■□□□□ 0.65
NPC1O15118 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.1■□□□□ 0.65
NPC1O15118 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
NPC1O15118 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.1■□□□□ 0.65
NPC1O15118 AC069148.1-201ENST00000608741 768 ntBASIC19.1■□□□□ 0.65
NPC1O15118 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.1■□□□□ 0.65
NPC1O15118 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1O15118 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NPC1O15118 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.1■□□□□ 0.65
NPC1O15118 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
NPC1O15118 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1O15118 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1O15118 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.09■□□□□ 0.65
NPC1O15118 SPDYE15P-201ENST00000424157 909 ntBASIC19.09■□□□□ 0.65
NPC1O15118 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.09■□□□□ 0.65
NPC1O15118 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1O15118 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.09■□□□□ 0.65
NPC1O15118 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.09■□□□□ 0.65
NPC1O15118 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1O15118 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
NPC1O15118 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.09■□□□□ 0.65
NPC1O15118 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1O15118 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.09■□□□□ 0.65
NPC1O15118 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1O15118 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.08■□□□□ 0.65
NPC1O15118 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1O15118 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1O15118 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.08■□□□□ 0.65
NPC1O15118 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1O15118 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NPC1O15118 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1O15118 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1O15118 AC036111.1-201ENST00000533973 1582 ntBASIC19.08■□□□□ 0.65
NPC1O15118 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1O15118 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1O15118 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1O15118 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1O15118 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.08■□□□□ 0.64
NPC1O15118 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.08■□□□□ 0.64
NPC1O15118 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.08■□□□□ 0.64
NPC1O15118 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.08■□□□□ 0.64
NPC1O15118 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.08■□□□□ 0.64
NPC1O15118 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1O15118 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1O15118 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1O15118 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1O15118 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms