Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.2■□□□□ 0.82
O00370 AP000525.1-201ENST00000608286 694 ntBASIC20.2■□□□□ 0.82
O00370 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.2■□□□□ 0.82
O00370 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.2■□□□□ 0.82
O00370 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
O00370 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
O00370 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.19■□□□□ 0.82
O00370 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.19■□□□□ 0.82
O00370 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
O00370 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.19■□□□□ 0.82
O00370 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 MFAP1P1-201ENST00000442257 1255 ntBASIC20.19■□□□□ 0.82
O00370 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.19■□□□□ 0.82
O00370 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
O00370 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.19■□□□□ 0.82
O00370 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 AP005242.2-201ENST00000580065 1175 ntBASIC20.19■□□□□ 0.82
O00370 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
O00370 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.19■□□□□ 0.82
O00370 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.19■□□□□ 0.82
O00370 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
O00370 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
O00370 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.18■□□□□ 0.82
O00370 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
O00370 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.18■□□□□ 0.82
O00370 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
O00370 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.18■□□□□ 0.82
O00370 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
O00370 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
O00370 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.18■□□□□ 0.82
O00370 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.17■□□□□ 0.82
O00370 AC026471.1-201ENST00000564629 3026 ntBASIC20.17■□□□□ 0.82
O00370 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
O00370 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.17■□□□□ 0.82
O00370 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.17■□□□□ 0.82
O00370 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.17■□□□□ 0.82
O00370 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.17■□□□□ 0.82
O00370 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 FITM1-202ENST00000559294 800 ntBASIC20.17■□□□□ 0.82
O00370 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.17■□□□□ 0.82
O00370 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.17■□□□□ 0.82
O00370 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
O00370 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
O00370 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
O00370 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.17■□□□□ 0.82
O00370 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
O00370 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
O00370 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
O00370 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.16■□□□□ 0.82
O00370 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
O00370 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
O00370 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
O00370 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
O00370 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.16■□□□□ 0.82
O00370 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
O00370 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
O00370 CRYGFP-201ENST00000418459 633 ntBASIC20.16■□□□□ 0.82
O00370 AL390955.1-201ENST00000428694 934 ntBASIC20.16■□□□□ 0.82
O00370 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms