Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.85□□□□□ -0.03
PCP4L1A6NKN8 AL122018.1-201ENST00000446607 2310 ntBASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.84□□□□□ -0.03
PCP4L1A6NKN8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
PCP4L1A6NKN8 AC121338.2-201ENST00000622535 1744 ntBASIC14.83□□□□□ -0.03
PCP4L1A6NKN8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCP4L1A6NKN8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PCP4L1A6NKN8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
PCP4L1A6NKN8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PCP4L1A6NKN8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 LINC00273-201ENST00000539813 1452 ntBASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCP4L1A6NKN8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms