Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC01549A6NIU2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 YBX1P1-201ENST00000445822 960 ntBASIC13.46□□□□□ -0.25
LINC01549A6NIU2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
LINC01549A6NIU2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 AC008764.6-201ENST00000595909 2069 ntBASIC13.46□□□□□ -0.26
LINC01549A6NIU2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LINC01549A6NIU2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 MYC-208ENST00000641036 567 ntBASIC13.45□□□□□ -0.26
LINC01549A6NIU2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC01549A6NIU2 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 TNRC18P3-201ENST00000441896 2691 ntBASIC13.44□□□□□ -0.26
LINC01549A6NIU2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC01549A6NIU2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms