Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 AC090164.3-201ENST00000610780 2143 ntBASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM49BA6NDI0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 AP002982.1-201ENST00000492365 877 ntBASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 AC131212.4-201ENST00000623606 975 ntBASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM49BA6NDI0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 TSPY20P-201ENST00000450910 630 ntBASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 AC091390.4-202ENST00000476426 537 ntBASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 AL353708.3-201ENST00000610272 989 ntBASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM49BA6NDI0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 RCC2P6-201ENST00000526625 1557 ntBASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 AC008040.2-201ENST00000461049 708 ntBASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 AL359736.2-201ENST00000621992 437 ntBASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM49BA6NDI0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM49BA6NDI0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms