Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SYCE3A1L190 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SYCE3A1L190 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SYCE3A1L190 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.55■■□□□ 1.04
SYCE3A1L190 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 AC134043.2-201ENST00000624206 2238 ntBASIC21.55■■□□□ 1.04
SYCE3A1L190 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.55■■□□□ 1.04
SYCE3A1L190 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SYCE3A1L190 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.55■■□□□ 1.04
SYCE3A1L190 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 AC137761.2-201ENST00000561729 223 ntBASIC21.55■■□□□ 1.04
SYCE3A1L190 AC145350.3-201ENST00000569033 163 ntBASIC21.55■■□□□ 1.04
SYCE3A1L190 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.55■■□□□ 1.04
SYCE3A1L190 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYCE3A1L190 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.55■■□□□ 1.04
SYCE3A1L190 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.55■■□□□ 1.04
SYCE3A1L190 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SYCE3A1L190 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYCE3A1L190 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SYCE3A1L190 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.54■■□□□ 1.04
SYCE3A1L190 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.54■■□□□ 1.04
SYCE3A1L190 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.54■■□□□ 1.04
SYCE3A1L190 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.54■■□□□ 1.04
SYCE3A1L190 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYCE3A1L190 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYCE3A1L190 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYCE3A1L190 AC093787.1-201ENST00000450396 207 ntBASIC21.54■■□□□ 1.04
SYCE3A1L190 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.54■■□□□ 1.04
SYCE3A1L190 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.54■■□□□ 1.04
SYCE3A1L190 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYCE3A1L190 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.53■■□□□ 1.04
SYCE3A1L190 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SYCE3A1L190 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.53■■□□□ 1.04
SYCE3A1L190 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SYCE3A1L190 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.53■■□□□ 1.04
SYCE3A1L190 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.53■■□□□ 1.04
SYCE3A1L190 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.53■■□□□ 1.04
SYCE3A1L190 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.53■■□□□ 1.04
SYCE3A1L190 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SYCE3A1L190 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYCE3A1L190 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.52■■□□□ 1.04
SYCE3A1L190 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
SYCE3A1L190 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
SYCE3A1L190 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.52■■□□□ 1.04
SYCE3A1L190 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.52■■□□□ 1.04
SYCE3A1L190 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 AL499627.1-201ENST00000569373 2188 ntBASIC21.52■■□□□ 1.04
SYCE3A1L190 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SYCE3A1L190 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYCE3A1L190 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SYCE3A1L190 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
SYCE3A1L190 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SYCE3A1L190 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SYCE3A1L190 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SYCE3A1L190 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SYCE3A1L190 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SYCE3A1L190 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SYCE3A1L190 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SYCE3A1L190 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.51■■□□□ 1.03
SYCE3A1L190 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SYCE3A1L190 OR10C1-204ENST00000622521 1039 ntBASIC21.51■■□□□ 1.03
SYCE3A1L190 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYCE3A1L190 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms