Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 TSPY20P-201ENST00000450910 630 ntBASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.61□□□□□ -0.23
TRGV4A0A0C4DH28 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 AL353807.1-201ENST00000427475 662 ntBASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 RPPH1-201ENST00000516869 333 ntBASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRGV4A0A0C4DH28 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 ITM2C-210ENST00000620962 501 ntBASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 AC131212.4-201ENST00000623606 975 ntBASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 HLA-A-209ENST00000638375 975 ntBASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV4A0A0C4DH28 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms