Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 AC090164.3-201ENST00000610780 2143 ntBASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 GPX1P1-201ENST00000388829 606 ntBASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 AC006015.1-201ENST00000429970 570 ntBASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV13-1A0A0B4J241 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAV13-1A0A0B4J241 AL390961.4-201ENST00000623958 2535 ntBASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 AL512625.2-201ENST00000417533 625 ntBASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 AC005181.1-201ENST00000604782 1256 ntBASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 Z98044.1-201ENST00000632503 1764 ntBASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAV13-1A0A0B4J241 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 SDHAP1-207ENST00000440850 2000 ntBASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 FP475955.4-201ENST00000623131 1990 ntBASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV13-1A0A0B4J241 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms