Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHKBP1Q8TBC3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 U8.7-201ENST00000364940 136 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 Y_RNA.361-201ENST00000365515 120 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 Y_RNA.369-201ENST00000365568 117 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-597P-201ENST00000365620 102 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 MIR1302-4-201ENST00000408701 150 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 RNA5SP120-201ENST00000410900 112 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 Y_RNA.630-201ENST00000411370 108 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 AC005300.1-201ENST00000428401 373 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 RNU2-27P-201ENST00000516185 142 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 AL451007.1-201ENST00000595491 289 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 AL670379.3-201ENST00000605040 251 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 SNORD98-201ENST00000636377 67 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 MAPK10-373ENST00000641983 6772 ntBASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHKBP1Q8TBC3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-884P-201ENST00000363889 107 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 SNORD87-201ENST00000364849 89 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-487P-201ENST00000365430 104 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-144P-201ENST00000383951 107 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 Y_RNA.584-201ENST00000391090 114 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 SNORA48.5-201ENST00000391143 135 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 AL512604.1-201ENST00000404812 257 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 MIR1183-201ENST00000408856 89 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 AC017083.1-201ENST00000428093 483 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 MTCO1P44-201ENST00000441935 243 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 AL158147.1-201ENST00000443970 75 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 Y_RNA.651-201ENST00000459380 103 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 RPL30P5-201ENST00000494923 336 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-581P-201ENST00000516214 105 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 AC120024.3-201ENST00000603167 156 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 uc_338.32-201ENST00000615087 172 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 AC007656.2-201ENST00000624902 4547 ntBASIC3.69□□□□□ -1.82
SHKBP1Q8TBC3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 MIR367-201ENST00000362299 68 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 Y_RNA.495-201ENST00000384435 112 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AC004866.1-201ENST00000411748 78 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AC115115.1-201ENST00000449927 248 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 RPS27AP10-201ENST00000496103 208 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 RN7SKP57-201ENST00000517248 293 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AC090142.3-201ENST00000519012 385 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 MIR3136-201ENST00000583498 78 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AL162713.1-201ENST00000604480 262 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AP003355.3-201ENST00000623465 114 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 snoZ196.1-201ENST00000625269 89 ntBASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHKBP1Q8TBC3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 AC022336.2-201ENST00000568966 2538 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 Y_RNA.35-201ENST00000362601 101 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 RNY3P5-201ENST00000384127 102 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 SNORD116-21-201ENST00000384507 92 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 MIR184-201ENST00000384962 84 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 CBX3P9-201ENST00000402326 552 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 RNA5SP504-201ENST00000410676 117 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-383P-201ENST00000410864 94 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 AC099548.1-201ENST00000421443 426 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 RNU6-344P-201ENST00000516635 111 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 SNORD11B-201ENST00000607707 90 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 AL591926.4-201ENST00000616895 298 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 AC008555.8-201ENST00000623602 2168 ntBASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHKBP1Q8TBC3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms