RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
LMBR1-222ENST00000638959 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
LMBR1-222ENST00000638959 SENP3Q9H4L4 574 aaPredicted RBP12.78□□□□□ -0.36
LMBR1-222ENST00000638959 PHF23Q9BUL5 403 aaPredicted RBP12.52□□□□□ -0.41
LMBR1-222ENST00000638959 POTEDQ86YR6 584 aa12.1□□□□□ -0.47
LMBR1-222ENST00000638959 FOXD1Q16676 465 aa11.96□□□□□ -0.49
LMBR1-222ENST00000638959 MSH5O43196 834 aa11.43□□□□□ -0.58
LMBR1-222ENST00000638959 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
LMBR1-222ENST00000638959 PPP6R1Q9UPN7 881 aa10.73□□□□□ -0.69
LMBR1-222ENST00000638959 ADRA2BP18089 450 aa10.69□□□□□ -0.7
LMBR1-222ENST00000638959 PLPPR3Q6T4P5 718 aa10.6□□□□□ -0.71
LMBR1-222ENST00000638959 CACNB1Q02641 598 aaPredicted RBP10.18□□□□□ -0.78
LMBR1-222ENST00000638959 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
LMBR1-222ENST00000638959 MAPK8IP2Q13387 824 aaPredicted RBP9.98□□□□□ -0.81
LMBR1-222ENST00000638959 SCAF1Q9H7N4 1312 aaKnown RBP9.81□□□□□ -0.84
LMBR1-222ENST00000638959 DCAF8L1A6NGE4 600 aa9.74□□□□□ -0.85
LMBR1-222ENST00000638959 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
LMBR1-222ENST00000638959 C1QBPQ07021 282 aaKnown RBP9.51□□□□□ -0.89
LMBR1-222ENST00000638959 HOXD11P31277 338 aaPredicted RBP9.42□□□□□ -0.9
LMBR1-222ENST00000638959 POTEHQ6S545 545 aa9.39□□□□□ -0.91
LMBR1-222ENST00000638959 RNF216Q9NWF9 866 aaPredicted RBP9.22□□□□□ -0.93
LMBR1-222ENST00000638959 PPP4R3CPQ6ZMV5 832 aa9.21□□□□□ -0.94
LMBR1-222ENST00000638959 CNKSR2Q8WXI2 1034 aa9.17□□□□□ -0.94
LMBR1-222ENST00000638959 DNAJC5BQ9UF47 199 aa9.16□□□□□ -0.94
LMBR1-222ENST00000638959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.961e-8■■■□□ 15.2
LMBR1-222ENST00000638959 DSG3P32926 999 aa8.88□□□□□ -0.99
LMBR1-222ENST00000638959 CAPN15O75808 1086 aa8.86□□□□□ -0.99
LMBR1-222ENST00000638959 SPINK5Q9NQ38 1064 aaPredicted RBP8.81□□□□□ -1
LMBR1-222ENST00000638959 U3KPZ7 1027 aaPredicted RBP8.76□□□□□ -1.01
LMBR1-222ENST00000638959 NCBP3Q53F19 620 aaKnown RBP8.7□□□□□ -1.02
LMBR1-222ENST00000638959 ABCB7O75027 752 aa8.6□□□□□ -1.03
LMBR1-222ENST00000638959 TRHP20396 242 aaPredicted RBP8.59□□□□□ -1.03
LMBR1-222ENST00000638959 NPM3O75607 178 aaKnown RBP8.56□□□□□ -1.04
LMBR1-222ENST00000638959 CHRDL2Q6WN34 429 aa8.54□□□□□ -1.04
LMBR1-222ENST00000638959 SP7Q8TDD2 431 aaPredicted RBP8.54□□□□□ -1.04
LMBR1-222ENST00000638959 RBM42Q9BTD8 480 aaKnown RBP8.53□□□□□ -1.04
LMBR1-222ENST00000638959 ZNF219Q9P2Y4 722 aaPredicted RBP8.52□□□□□ -1.05
LMBR1-222ENST00000638959 APLP2Q06481 763 aa8.49□□□□□ -1.05
LMBR1-222ENST00000638959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.33□□□□□ -1.08
LMBR1-222ENST00000638959 HNRNPUL2Q1KMD3 747 aaKnown RBP8.33□□□□□ -1.08
LMBR1-222ENST00000638959 SLC4A2P04920 1241 aa8.29□□□□□ -1.08
LMBR1-222ENST00000638959 HAX1O00165 279 aa8.26□□□□□ -1.09
LMBR1-222ENST00000638959 SAMD1Q6SPF0 538 aaPredicted RBP8.25□□□□□ -1.09
LMBR1-222ENST00000638959 PIP4P2Q8N4L2 257 aa8.21□□□□□ -1.1
LMBR1-222ENST00000638959 POLA2Q14181 598 aa8.19□□□□□ -1.1
LMBR1-222ENST00000638959 AKT1S1Q96B36 256 aa8.18□□□□□ -1.1
LMBR1-222ENST00000638959 REM2Q8IYK8 340 aaPredicted RBP8.11□□□□□ -1.11
LMBR1-222ENST00000638959 PITPNM1O00562 1244 aa8.05□□□□□ -1.12
LMBR1-222ENST00000638959 FXR2P51116 673 aaKnown RBP eCLIP8.05□□□□□ -1.12
LMBR1-222ENST00000638959 EVX2Q03828 476 aa8.05□□□□□ -1.12
LMBR1-222ENST00000638959 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
LMBR1-222ENST00000638959 LHX8Q68G74 356 aa8□□□□□ -1.13
LMBR1-222ENST00000638959 ZBTB12Q9Y330 459 aaPredicted RBP7.99□□□□□ -1.13
LMBR1-222ENST00000638959 OSCARQ8IYS5 282 aa7.97□□□□□ -1.13
LMBR1-222ENST00000638959 MYCNP04198 464 aaPredicted RBP7.95□□□□□ -1.14
LMBR1-222ENST00000638959 KCNA4P22459 653 aa7.9□□□□□ -1.14
LMBR1-222ENST00000638959 GABBR2O75899 941 aa7.86□□□□□ -1.15
LMBR1-222ENST00000638959 PRKAR2AP13861 404 aaKnown RBP7.84□□□□□ -1.15
LMBR1-222ENST00000638959 C19orf67A6NJJ6 358 aa7.82□□□□□ -1.16
LMBR1-222ENST00000638959 ATF5Q9Y2D1 282 aaPredicted RBP7.79□□□□□ -1.16
LMBR1-222ENST00000638959 CLEC11AQ9Y240 323 aa7.76□□□□□ -1.17
LMBR1-222ENST00000638959 SPDYE1Q8NFV5 336 aaPredicted RBP7.69□□□□□ -1.18
LMBR1-222ENST00000638959 SPDYE2BA6NHP3 402 aa7.67□□□□□ -1.18
LMBR1-222ENST00000638959 SPDYE6P0CI01 402 aa7.67□□□□□ -1.18
LMBR1-222ENST00000638959 SPDYE2Q495Y8 402 aa7.67□□□□□ -1.18
LMBR1-222ENST00000638959 POTEIP0CG38 1075 aa7.66□□□□□ -1.18
LMBR1-222ENST00000638959 CHADLQ6NUI6 762 aa7.64□□□□□ -1.19
LMBR1-222ENST00000638959 POTEMA6NI47 508 aa7.58□□□□□ -1.2
LMBR1-222ENST00000638959 CD44P16070 742 aaKnown RBP7.57□□□□□ -1.2
LMBR1-222ENST00000638959 FBLN2P98095 1184 aa7.57□□□□□ -1.2
LMBR1-222ENST00000638959 DCBLD2Q96PD2 775 aa7.57□□□□□ -1.2
LMBR1-222ENST00000638959 FOXD4L1Q9NU39 408 aa7.56□□□□□ -1.2
LMBR1-222ENST00000638959 POTEGQ6S5H5 508 aa7.53□□□□□ -1.2
LMBR1-222ENST00000638959 PRR29P0C7W0 189 aa7.52□□□□□ -1.21
LMBR1-222ENST00000638959 CLCN6P51797 869 aa7.52□□□□□ -1.21
LMBR1-222ENST00000638959 ZNF692Q9BU19 519 aaPredicted RBP7.52□□□□□ -1.21
LMBR1-222ENST00000638959 OTUD5Q96G74 571 aa7.5□□□□□ -1.21
LMBR1-222ENST00000638959 SSUH2Q9Y2M2 353 aa7.49□□□□□ -1.21
LMBR1-222ENST00000638959 PCDH10Q9P2E7 1040 aa7.44□□□□□ -1.22
LMBR1-222ENST00000638959 FARP1Q9Y4F1 1045 aaPredicted RBP7.44□□□□□ -1.22
LMBR1-222ENST00000638959 POTEB2H3BUK9 544 aa7.41□□□□□ -1.22
LMBR1-222ENST00000638959 MKRN4PQ13434 485 aaPredicted RBP7.39□□□□□ -1.23
LMBR1-222ENST00000638959 PABPN1Q86U42 306 aaKnown RBP eCLIP7.39□□□□□ -1.23
LMBR1-222ENST00000638959 ZNF579Q8NAF0 562 aaKnown RBP7.39□□□□□ -1.23
LMBR1-222ENST00000638959 ZRANB1Q9UGI0 708 aa7.37□□□□□ -1.23
LMBR1-222ENST00000638959 GALR2O43603 387 aaPredicted RBP7.36□□□□□ -1.23
LMBR1-222ENST00000638959 SLC4A1APQ9BWU0 796 aaKnown RBP7.36□□□□□ -1.23
LMBR1-222ENST00000638959 ATXN8OSP0DMR3 200 aa7.34□□□□□ -1.23
LMBR1-222ENST00000638959 FAM163AQ96GL9 167 aaPredicted RBP7.26□□□□□ -1.25
LMBR1-222ENST00000638959 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
LMBR1-222ENST00000638959 PELP1Q8IZL8 1130 aaKnown RBP7.24□□□□□ -1.25
LMBR1-222ENST00000638959 ZBTB22O15209 634 aa7.23□□□□□ -1.25
LMBR1-222ENST00000638959 MAMSTRQ6ZN01 415 aa7.23□□□□□ -1.25
LMBR1-222ENST00000638959 METRNQ9UJH8 293 aa7.23□□□□□ -1.25
LMBR1-222ENST00000638959 PAK3O75914 559 aaPredicted RBP7.22□□□□□ -1.25
LMBR1-222ENST00000638959 PHF12Q96QT6 1004 aa7.22□□□□□ -1.25
LMBR1-222ENST00000638959 POTEJP0CG39 1038 aa7.19□□□□□ -1.26
LMBR1-222ENST00000638959 SCUBE2Q9NQ36 999 aa7.19□□□□□ -1.26
LMBR1-222ENST00000638959 SLC39A7Q92504 469 aa7.18□□□□□ -1.26
LMBR1-222ENST00000638959 C7P10643 843 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms