RNA–Protein interactions for RNA: ENST00000391143.1

SNORA48.5-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.5-201ENST00000391143 AEBP2Q6ZN18 517 aaPredicted RBP12.52□□□□□ -0.41
SNORA48.5-201ENST00000391143 CHIC1Q5VXU3 224 aa12.01□□□□□ -0.49
SNORA48.5-201ENST00000391143 SENP3Q9H4L4 574 aaPredicted RBP10.68□□□□□ -0.7
SNORA48.5-201ENST00000391143 PHF23Q9BUL5 403 aaPredicted RBP10.56□□□□□ -0.72
SNORA48.5-201ENST00000391143 FOXD1Q16676 465 aa9.93□□□□□ -0.82
SNORA48.5-201ENST00000391143 PLPPR3Q6T4P5 718 aa9.68□□□□□ -0.86
SNORA48.5-201ENST00000391143 ADRA2BP18089 450 aa9.39□□□□□ -0.91
SNORA48.5-201ENST00000391143 PPP6R1Q9UPN7 881 aa9.38□□□□□ -0.91
SNORA48.5-201ENST00000391143 PIAS4Q8N2W9 510 aaPredicted RBP9.36□□□□□ -0.91
SNORA48.5-201ENST00000391143 MSH5O43196 834 aa9.25□□□□□ -0.93
SNORA48.5-201ENST00000391143 POTEDQ86YR6 584 aa8.82□□□□□ -1
SNORA48.5-201ENST00000391143 MAPK8IP2Q13387 824 aaPredicted RBP8.59□□□□□ -1.03
SNORA48.5-201ENST00000391143 SCAF1Q9H7N4 1312 aaKnown RBP8.58□□□□□ -1.04
SNORA48.5-201ENST00000391143 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
SNORA48.5-201ENST00000391143 DMRT2Q9Y5R5 561 aa8.47□□□□□ -1.05
SNORA48.5-201ENST00000391143 NISCHQ9Y2I1 1504 aa8.36□□□□□ -1.07
SNORA48.5-201ENST00000391143 CNKSR2Q8WXI2 1034 aa8.3□□□□□ -1.08
SNORA48.5-201ENST00000391143 DCAF8L1A6NGE4 600 aa8.23□□□□□ -1.09
SNORA48.5-201ENST00000391143 NCBP3Q53F19 620 aaKnown RBP8.22□□□□□ -1.09
SNORA48.5-201ENST00000391143 HOXD11P31277 338 aaPredicted RBP8.19□□□□□ -1.1
SNORA48.5-201ENST00000391143 RNF216Q9NWF9 866 aaPredicted RBP8.18□□□□□ -1.1
SNORA48.5-201ENST00000391143 NPM3O75607 178 aaKnown RBP8.09□□□□□ -1.11
SNORA48.5-201ENST00000391143 KCNA4P22459 653 aa8.06□□□□□ -1.12
SNORA48.5-201ENST00000391143 ABCC9O60706 1549 aa8.04□□□□□ -1.12
SNORA48.5-201ENST00000391143 CACNB1Q02641 598 aaPredicted RBP7.91□□□□□ -1.14
SNORA48.5-201ENST00000391143 RNF39Q9H2S5 420 aa7.9□□□□□ -1.14
SNORA48.5-201ENST00000391143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.89□□□□□ -1.15
SNORA48.5-201ENST00000391143 DNAJC5BQ9UF47 199 aa7.89□□□□□ -1.15
SNORA48.5-201ENST00000391143 C1QBPQ07021 282 aaKnown RBP7.79□□□□□ -1.16
SNORA48.5-201ENST00000391143 U3KPZ7 1027 aaPredicted RBP7.69□□□□□ -1.18
SNORA48.5-201ENST00000391143 SLC4A2P04920 1241 aa7.68□□□□□ -1.18
SNORA48.5-201ENST00000391143 SLC4A1APQ9BWU0 796 aaKnown RBP7.65□□□□□ -1.18
SNORA48.5-201ENST00000391143 CCDC180Q9P1Z9 1646 aa7.63□□□□□ -1.19
SNORA48.5-201ENST00000391143 CAPN15O75808 1086 aa7.58□□□□□ -1.2
SNORA48.5-201ENST00000391143 SPINK5Q9NQ38 1064 aaPredicted RBP7.56□□□□□ -1.2
SNORA48.5-201ENST00000391143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.53□□□□□ -1.2
SNORA48.5-201ENST00000391143 HNRNPUL2Q1KMD3 747 aaKnown RBP7.53□□□□□ -1.2
SNORA48.5-201ENST00000391143 APLP2Q06481 763 aa7.51□□□□□ -1.21
SNORA48.5-201ENST00000391143 MYCNP04198 464 aaPredicted RBP7.49□□□□□ -1.21
SNORA48.5-201ENST00000391143 TRHP20396 242 aaPredicted RBP7.49□□□□□ -1.21
SNORA48.5-201ENST00000391143 SAMD1Q6SPF0 538 aaPredicted RBP7.49□□□□□ -1.21
SNORA48.5-201ENST00000391143 DNAJC5Q9H3Z4 198 aa7.49□□□□□ -1.21
SNORA48.5-201ENST00000391143 FOXD4L1Q9NU39 408 aa7.48□□□□□ -1.21
SNORA48.5-201ENST00000391143 RB1CC1Q8TDY2 1594 aa7.46□□□□□ -1.21
SNORA48.5-201ENST00000391143 DSG3P32926 999 aa7.44□□□□□ -1.22
SNORA48.5-201ENST00000391143 PABPN1Q86U42 306 aaKnown RBP eCLIP7.44□□□□□ -1.22
SNORA48.5-201ENST00000391143 ZNF219Q9P2Y4 722 aaPredicted RBP7.44□□□□□ -1.22
SNORA48.5-201ENST00000391143 ABCB7O75027 752 aa7.41□□□□□ -1.22
SNORA48.5-201ENST00000391143 ZBTB22O15209 634 aa7.4□□□□□ -1.22
SNORA48.5-201ENST00000391143 NACADO15069 1562 aa7.32□□□□□ -1.24
SNORA48.5-201ENST00000391143 UNC13AQ9UPW8 1703 aa7.3□□□□□ -1.24
SNORA48.5-201ENST00000391143 ATF5Q9Y2D1 282 aaPredicted RBP7.3□□□□□ -1.24
SNORA48.5-201ENST00000391143 POLA2Q14181 598 aa7.29□□□□□ -1.24
SNORA48.5-201ENST00000391143 BICRAQ9NZM4 1560 aa7.27□□□□□ -1.25
SNORA48.5-201ENST00000391143 CECR2Q9BXF3 1484 aa7.26□□□□□ -1.25
SNORA48.5-201ENST00000391143 DCAF8L2P0C7V8 631 aa7.26□□□□□ -1.25
SNORA48.5-201ENST00000391143 CC2D2AQ9P2K1 1620 aa7.23□□□□□ -1.25
SNORA48.5-201ENST00000391143 EHMT2Q96KQ7 1210 aa7.23□□□□□ -1.25
SNORA48.5-201ENST00000391143 ATXN8OSP0DMR3 200 aa7.2□□□□□ -1.26
SNORA48.5-201ENST00000391143 CSRNP3Q8WYN3 585 aa7.17□□□□□ -1.26
SNORA48.5-201ENST00000391143 ZBTB12Q9Y330 459 aaPredicted RBP7.14□□□□□ -1.27
SNORA48.5-201ENST00000391143 EIF4G1Q04637 1599 aaKnown RBP7.12□□□□□ -1.27
SNORA48.5-201ENST00000391143 RBM42Q9BTD8 480 aaKnown RBP7.11□□□□□ -1.27
SNORA48.5-201ENST00000391143 SHROOM4Q9ULL8 1493 aa7.1□□□□□ -1.27
SNORA48.5-201ENST00000391143 MYO15BQ96JP2 1530 aa7.08□□□□□ -1.28
SNORA48.5-201ENST00000391143 OSCARQ8IYS5 282 aa7.06□□□□□ -1.28
SNORA48.5-201ENST00000391143 CUX2O14529 1486 aa7.05□□□□□ -1.28
SNORA48.5-201ENST00000391143 FBLN2P98095 1184 aa7.04□□□□□ -1.28
SNORA48.5-201ENST00000391143 TRIM41Q8WV44 630 aa7.03□□□□□ -1.28
SNORA48.5-201ENST00000391143 MKRN4PQ13434 485 aaPredicted RBP6.96□□□□□ -1.3
SNORA48.5-201ENST00000391143 AKT1S1Q96B36 256 aa6.96□□□□□ -1.3
SNORA48.5-201ENST00000391143 SCRIBQ14160 1630 aa6.96□□□□□ -1.3
SNORA48.5-201ENST00000391143 POTEHQ6S545 545 aa6.95□□□□□ -1.3
SNORA48.5-201ENST00000391143 ERCC6Q03468 1493 aa6.95□□□□□ -1.3
SNORA48.5-201ENST00000391143 CHRDL2Q6WN34 429 aa6.92□□□□□ -1.3
SNORA48.5-201ENST00000391143 SPDYE2BA6NHP3 402 aa6.91□□□□□ -1.3
SNORA48.5-201ENST00000391143 SPDYE6P0CI01 402 aa6.91□□□□□ -1.3
SNORA48.5-201ENST00000391143 SPDYE2Q495Y8 402 aa6.91□□□□□ -1.3
SNORA48.5-201ENST00000391143 REM2Q8IYK8 340 aaPredicted RBP6.91□□□□□ -1.3
SNORA48.5-201ENST00000391143 ZNF692Q9BU19 519 aaPredicted RBP6.89□□□□□ -1.31
SNORA48.5-201ENST00000391143 DCAF1Q9Y4B6 1507 aa6.86□□□□□ -1.31
SNORA48.5-201ENST00000391143 ZCCHC6Q5VYS8 1495 aaKnown RBP6.85□□□□□ -1.31
SNORA48.5-201ENST00000391143 PITPNM1O00562 1244 aa6.84□□□□□ -1.31
SNORA48.5-201ENST00000391143 CLEC11AQ9Y240 323 aa6.81□□□□□ -1.32
SNORA48.5-201ENST00000391143 SSUH2Q9Y2M2 353 aa6.81□□□□□ -1.32
SNORA48.5-201ENST00000391143 NESP48681 1621 aa6.8□□□□□ -1.32
SNORA48.5-201ENST00000391143 THOC2Q8NI27 1593 aaKnown RBP6.78□□□□□ -1.32
SNORA48.5-201ENST00000391143 SPDYE1Q8NFV5 336 aaPredicted RBP6.78□□□□□ -1.32
SNORA48.5-201ENST00000391143 NCAPD3P42695 1498 aa6.78□□□□□ -1.32
SNORA48.5-201ENST00000391143 PIP4P2Q8N4L2 257 aa6.77□□□□□ -1.33
SNORA48.5-201ENST00000391143 SPDYE4A6NLX3 237 aa6.73□□□□□ -1.33
SNORA48.5-201ENST00000391143 SMARCA2P51531 1590 aa6.73□□□□□ -1.33
SNORA48.5-201ENST00000391143 FXR2P51116 673 aaKnown RBP eCLIP6.72□□□□□ -1.33
SNORA48.5-201ENST00000391143 ATAD2BQ9ULI0 1458 aa6.71□□□□□ -1.34
SNORA48.5-201ENST00000391143 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
SNORA48.5-201ENST00000391143 BAZ1AQ9NRL2 1556 aaPredicted RBP6.69□□□□□ -1.34
SNORA48.5-201ENST00000391143 KIF21AQ7Z4S6 1674 aa6.68□□□□□ -1.34
SNORA48.5-201ENST00000391143 PRKAR2AP13861 404 aaKnown RBP6.68□□□□□ -1.34
SNORA48.5-201ENST00000391143 LAMC3Q9Y6N6 1575 aa6.68□□□□□ -1.34
SNORA48.5-201ENST00000391143 HMGXB3Q12766 1538 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms