Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MIR99A-201ENST00000384906 81 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 U3.43-201ENST00000410734 213 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 AC099782.1-201ENST00000425889 474 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 AL590399.4-201ENST00000436561 601 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 AC069285.2-201ENST00000440210 275 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6-231P-201ENST00000517122 103 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 IGHVIII-11-1-201ENST00000522733 267 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 FAM30C-201ENST00000561158 410 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 AC233702.7-202ENST00000582941 211 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 MIR5682-201ENST00000584864 76 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 CPHL1P-201ENST00000461341 3407 ntBASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KRTAP3-3Q9BYR6 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 SNORA38B-201ENST00000363524 131 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 Y_RNA.330-201ENST00000365230 109 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6-171P-201ENST00000384354 107 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 AL359092.1-201ENST00000417156 265 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 S100A11P1-201ENST00000477525 312 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 IGKV3D-34-201ENST00000522638 302 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 MIR4800-201ENST00000537353 80 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 MIR7515-201ENST00000637837 67 ntBASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.17□□□□□ -1.9
KRTAP3-3Q9BYR6 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 RNA5SP321-201ENST00000362722 111 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU1-59P-201ENST00000364829 162 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 RNA5SP427-201ENST00000365323 119 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 RNU6-1279P-201ENST00000383917 103 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 SNORA11D-201ENST00000408548 128 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 SNORA11E-201ENST00000408778 128 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 AC092967.1-201ENST00000449016 481 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 AL591623.2-201ENST00000449978 222 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 RN7SL221P-201ENST00000466190 281 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 RN7SL776P-201ENST00000493390 268 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 AL390198.2-201ENST00000510553 222 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 NAMPTP3-201ENST00000569273 224 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 MIR4264-201ENST00000583520 66 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 MIR3159-201ENST00000584572 74 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 AC091133.5-201ENST00000603088 301 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 AL132640.3-201ENST00000630473 177 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 MIR665-201ENST00000635949 72 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 BCORP1-203ENST00000513194 5093 ntBASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRTAP3-3Q9BYR6 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRTAP3-3Q9BYR6 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms