RNA–Protein interactions for RNA: ENST00000507846.5

PCDH18-203, Transcript of protocadherin 18, humanhuman

TSL 1 (best) BASIC

Gene PCDH18, Length 4,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-203ENST00000507846 DCAF8L2P0C7V8 631 aa11.24□□□□□ -0.61
PCDH18-203ENST00000507846 NISCHQ9Y2I1 1504 aa11.18□□□□□ -0.62
PCDH18-203ENST00000507846 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
PCDH18-203ENST00000507846 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
PCDH18-203ENST00000507846 SHROOM4Q9ULL8 1493 aa10.73□□□□□ -0.69
PCDH18-203ENST00000507846 ZEB1P37275 1124 aaPredicted RBP10.65□□□□□ -0.7
PCDH18-203ENST00000507846 MYT1Q01538 1121 aa10.64□□□□□ -0.71
PCDH18-203ENST00000507846 CENPBP07199 599 aaPredicted RBP10.59□□□□□ -0.71
PCDH18-203ENST00000507846 PCGF6Q9BYE7 350 aa10.59□□□□□ -0.71
PCDH18-203ENST00000507846 APLP2Q06481 763 aa10.54□□□□□ -0.72
PCDH18-203ENST00000507846 EHMT2Q96KQ7 1210 aa10.44□□□□□ -0.74
PCDH18-203ENST00000507846 CCER1Q8TC90 406 aaPredicted RBP10.41□□□□□ -0.74
PCDH18-203ENST00000507846 ERICH6Q7L0X2 663 aa10.34□□□□□ -0.75
PCDH18-203ENST00000507846 FAM9AQ8IZU1 332 aaPredicted RBP10.34□□□□□ -0.75
PCDH18-203ENST00000507846 HRCP23327 699 aa10.3□□□□□ -0.76
PCDH18-203ENST00000507846 TRIM41Q8WV44 630 aa10.3□□□□□ -0.76
PCDH18-203ENST00000507846 TRIM26Q12899 539 aaPredicted RBP10.25□□□□□ -0.77
PCDH18-203ENST00000507846 NEFLP07196 543 aa10.22□□□□□ -0.77
PCDH18-203ENST00000507846 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
PCDH18-203ENST00000507846 ABCC9O60706 1549 aa10.14□□□□□ -0.79
PCDH18-203ENST00000507846 UBTFP17480 764 aaKnown RBP10.1□□□□□ -0.79
PCDH18-203ENST00000507846 YTHDC1Q96MU7 727 aaKnown RBP10.08□□□□□ -0.8
PCDH18-203ENST00000507846 CHIC1Q5VXU3 224 aa10.04□□□□□ -0.8
PCDH18-203ENST00000507846 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.81
PCDH18-203ENST00000507846 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
PCDH18-203ENST00000507846 LOC105371045A0A1W2PR82 267 aa9.9□□□□□ -0.83
PCDH18-203ENST00000507846 DIEXFQ68CQ4 756 aaKnown RBP9.89□□□□□ -0.83
PCDH18-203ENST00000507846 PPARGC1BQ86YN6 1023 aaKnown RBP9.89□□□□□ -0.83
PCDH18-203ENST00000507846 DAXXQ9UER7 740 aaPredicted RBP9.86□□□□□ -0.83
PCDH18-203ENST00000507846 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
PCDH18-203ENST00000507846 HNRNPUL2Q1KMD3 747 aaKnown RBP9.78□□□□□ -0.84
PCDH18-203ENST00000507846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.77□□□□□ -0.85
PCDH18-203ENST00000507846 RTL5Q5HYW3 569 aaPredicted RBP9.77□□□□□ -0.85
PCDH18-203ENST00000507846 GTF3C3Q9Y5Q9 886 aa9.75□□□□□ -0.85
PCDH18-203ENST00000507846 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.86
PCDH18-203ENST00000507846 CLSPNQ9HAW4 1339 aa9.71□□□□□ -0.86
PCDH18-203ENST00000507846 ITGAEP38570 1179 aa9.7□□□□□ -0.86
PCDH18-203ENST00000507846 ZNF316A6NFI3 1004 aaPredicted RBP9.68□□□□□ -0.86
PCDH18-203ENST00000507846 CDK11AQ9UQ88 783 aaPredicted RBP9.63□□□□□ -0.87
PCDH18-203ENST00000507846 POLR3GLQ9BT43 218 aa9.62□□□□□ -0.87
PCDH18-203ENST00000507846 DCAF1Q9Y4B6 1507 aa9.6□□□□□ -0.87
PCDH18-203ENST00000507846 ANP32CO43423 234 aa9.6□□□□□ -0.87
PCDH18-203ENST00000507846 MYT1LQ9UL68 1186 aa9.54□□□□□ -0.88
PCDH18-203ENST00000507846 BCANQ96GW7 911 aa9.52□□□□□ -0.89
PCDH18-203ENST00000507846 FAM50AQ14320 339 aaKnown RBP9.51□□□□□ -0.89
PCDH18-203ENST00000507846 NEUROD1Q13562 356 aa9.47□□□□□ -0.89
PCDH18-203ENST00000507846 ANP32AP39687 249 aaKnown RBP9.47□□□□□ -0.89
PCDH18-203ENST00000507846 CNGB1Q14028 1251 aaPredicted RBP9.46□□□□□ -0.9
PCDH18-203ENST00000507846 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
PCDH18-203ENST00000507846 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
PCDH18-203ENST00000507846 SCAF1Q9H7N4 1312 aaKnown RBP9.38□□□□□ -0.91
PCDH18-203ENST00000507846 FKBP8Q14318 412 aa9.37□□□□□ -0.91
PCDH18-203ENST00000507846 CCDC180Q9P1Z9 1646 aa9.37□□□□□ -0.91
PCDH18-203ENST00000507846 RB1CC1Q8TDY2 1594 aa9.35□□□□□ -0.91
PCDH18-203ENST00000507846 SLC4A1APQ9BWU0 796 aaKnown RBP9.34□□□□□ -0.91
PCDH18-203ENST00000507846 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
PCDH18-203ENST00000507846 ZCCHC6Q5VYS8 1495 aaKnown RBP9.31□□□□□ -0.92
PCDH18-203ENST00000507846 TONSLQ96HA7 1378 aa9.3□□□□□ -0.92
PCDH18-203ENST00000507846 GLIPR1L2Q4G1C9 344 aa9.3□□□□□ -0.92
PCDH18-203ENST00000507846 CANXP27824 592 aaKnown RBP9.29□□□□□ -0.92
PCDH18-203ENST00000507846 ZNF326Q5BKZ1 582 aaKnown RBP9.29□□□□□ -0.92
PCDH18-203ENST00000507846 HNRNPUQ00839 825 aaKnown RBP eCLIP9.28□□□□□ -0.92
PCDH18-203ENST00000507846 ANP32BQ92688 251 aaKnown RBP9.26□□□□□ -0.93
PCDH18-203ENST00000507846 SCRIBQ14160 1630 aa9.26□□□□□ -0.93
PCDH18-203ENST00000507846 DDX10Q13206 875 aaKnown RBP9.25□□□□□ -0.93
PCDH18-203ENST00000507846 NPM2Q86SE8 214 aaKnown RBP9.24□□□□□ -0.93
PCDH18-203ENST00000507846 MIER1Q8N108 512 aa9.24□□□□□ -0.93
PCDH18-203ENST00000507846 EIF5BO60841 1220 aaKnown RBP9.24□□□□□ -0.93
PCDH18-203ENST00000507846 UPF2Q9HAU5 1272 aaKnown RBP9.24□□□□□ -0.93
PCDH18-203ENST00000507846 NEFMP07197 916 aa9.23□□□□□ -0.93
PCDH18-203ENST00000507846 CCDC136Q96JN2 1154 aa9.23□□□□□ -0.93
PCDH18-203ENST00000507846 ANP32EQ9BTT0 268 aa9.22□□□□□ -0.93
PCDH18-203ENST00000507846 EEA1Q15075 1411 aa9.21□□□□□ -0.94
PCDH18-203ENST00000507846 FBLN2P98095 1184 aa9.2□□□□□ -0.94
PCDH18-203ENST00000507846 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.2□□□□□ -0.94
PCDH18-203ENST00000507846 NACADO15069 1562 aa9.19□□□□□ -0.94
PCDH18-203ENST00000507846 FAM9BQ8IZU0 186 aa9.18□□□□□ -0.94
PCDH18-203ENST00000507846 TMC1Q8TDI8 760 aa9.16□□□□□ -0.94
PCDH18-203ENST00000507846 MYO15BQ96JP2 1530 aa9.15□□□□□ -0.94
PCDH18-203ENST00000507846 MRS2Q9HD23 443 aa9.15□□□□□ -0.94
PCDH18-203ENST00000507846 HSP90AA1P07900 732 aaKnown RBP9.15□□□□□ -0.94
PCDH18-203ENST00000507846 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
PCDH18-203ENST00000507846 NBR1Q14596 966 aa9.14□□□□□ -0.95
PCDH18-203ENST00000507846 P3H3Q8IVL6 736 aa9.14□□□□□ -0.95
PCDH18-203ENST00000507846 CLIP1P30622 1438 aa9.14□□□□□ -0.95
PCDH18-203ENST00000507846 EIF4G2P78344 907 aaKnown RBP eCLIP9.11□□□□□ -0.95
PCDH18-203ENST00000507846 GOLGA3Q08378 1498 aa9.11□□□□□ -0.95
PCDH18-203ENST00000507846 CEP162Q5TB80 1403 aa9.1□□□□□ -0.95
PCDH18-203ENST00000507846 PPM1GO15355 546 aaPredicted RBP9.09□□□□□ -0.95
PCDH18-203ENST00000507846 TNIKQ9UKE5 1360 aa9.08□□□□□ -0.96
PCDH18-203ENST00000507846 BECN1Q14457 450 aa9.08□□□□□ -0.96
PCDH18-203ENST00000507846 ERCC6Q03468 1493 aa9.07□□□□□ -0.96
PCDH18-203ENST00000507846 WDR43Q15061 677 aaKnown RBP eCLIP9.06□□□□□ -0.96
PCDH18-203ENST00000507846 PPP4R2Q9NY27 417 aa9.06□□□□□ -0.96
PCDH18-203ENST00000507846 ZNF777Q9ULD5 760 aaPredicted RBP9.06□□□□□ -0.96
PCDH18-203ENST00000507846 MTUS2Q5JR59 1369 aa9.05□□□□□ -0.96
PCDH18-203ENST00000507846 ERICH6BQ5W0A0 696 aa9.05□□□□□ -0.96
PCDH18-203ENST00000507846 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
PCDH18-203ENST00000507846 TIMELESSQ9UNS1 1208 aa9.04□□□□□ -0.96
PCDH18-203ENST00000507846 RSF1Q96T23 1441 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms