Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 RCC2P6-201ENST00000526625 1557 ntBASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 AC004951.3-201ENST00000418645 1148 ntBASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 BX664615.1-201ENST00000443558 458 ntBASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 AC011506.1-201ENST00000474329 610 ntBASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 SLC25A1P4-201ENST00000567977 778 ntBASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 AC011298.2-201ENST00000617989 482 ntBASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHB11Q9Y5F2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 AP000692.2-201ENST00000608391 879 ntBASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 AC130371.2-201ENST00000619443 611 ntBASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHB11Q9Y5F2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 KRT8P41-201ENST00000533985 1514 ntBASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 AK4P3-201ENST00000418260 669 ntBASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHB11Q9Y5F2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms