Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 AC009947.2-201ENST00000444014 672 ntBASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00588Q9Y4M8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 AP000523.1-201ENST00000398242 1049 ntBASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 CR769767.2-201ENST00000622735 460 ntBASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 GPAT2P1-201ENST00000444924 1672 ntBASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00588Q9Y4M8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 KRT8P3-201ENST00000519669 1449 ntBASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 FAM8A6P-201ENST00000407496 1135 ntBASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00588Q9Y4M8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms