Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CUEDC1Q9NWM3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 FP475955.4-201ENST00000623131 1990 ntBASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 UNC93B2-201ENST00000285383 730 ntBASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 PRSS44-201ENST00000515154 1146 ntBASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 CKBP1-201ENST00000565489 1086 ntBASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CUEDC1Q9NWM3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CUEDC1Q9NWM3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CUEDC1Q9NWM3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CUEDC1Q9NWM3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.33■□□□□ 0.53
CUEDC1Q9NWM3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CUEDC1Q9NWM3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CUEDC1Q9NWM3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CUEDC1Q9NWM3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.33■□□□□ 0.53
CUEDC1Q9NWM3 FEM1AP3-201ENST00000403722 1741 ntBASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 CRYGFP-201ENST00000418459 633 ntBASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 MFAP1P1-201ENST00000442257 1255 ntBASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CUEDC1Q9NWM3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 AC096733.2-201ENST00000609937 1394 ntBASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CUEDC1Q9NWM3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 MMP23A-201ENST00000234610 1017 ntBASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CUEDC1Q9NWM3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms