Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC27.16■■□□□ 1.94
SLC52A1Q9NWF4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 AL022342.1-201ENST00000400363 863 ntBASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC27.15■■□□□ 1.94
SLC52A1Q9NWF4 AC008556.1-201ENST00000610908 2040 ntBASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 AC104819.1-201ENST00000504587 486 ntBASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 AC004263.2-201ENST00000617183 678 ntBASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 AC023511.2-201ENST00000618803 211 ntBASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 RCC2P3-201ENST00000418112 1537 ntBASIC27.14■■□□□ 1.94
SLC52A1Q9NWF4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SLC52A1Q9NWF4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SLC52A1Q9NWF4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SLC52A1Q9NWF4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SLC52A1Q9NWF4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SLC52A1Q9NWF4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC27.14■■□□□ 1.93
SLC52A1Q9NWF4 AC007375.3-201ENST00000600936 2314 ntBASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 AL662844.1-201ENST00000546340 181 ntBASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 MIR3180-4-201ENST00000582223 153 ntBASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC27.13■■□□□ 1.93
SLC52A1Q9NWF4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 AP003733.1-201ENST00000491725 852 ntBASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC52A1Q9NWF4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 AC233702.3-201ENST00000578656 1387 ntBASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 MIR564-202ENST00000385049 94 ntBASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 AL121912.1-201ENST00000603683 238 ntBASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SLC52A1Q9NWF4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms