Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 AC004264.1-201ENST00000608354 794 ntBASIC17.67■□□□□ 0.42
RLIMQ9NVW2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 HLA-A-209ENST00000638375 975 ntBASIC17.67■□□□□ 0.42
RLIMQ9NVW2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RLIMQ9NVW2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 KRASP1-201ENST00000407852 552 ntBASIC17.66■□□□□ 0.42
RLIMQ9NVW2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 C1QL1P1-201ENST00000568105 661 ntBASIC17.66■□□□□ 0.42
RLIMQ9NVW2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RLIMQ9NVW2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 AC239809.2-201ENST00000415381 517 ntBASIC17.65■□□□□ 0.42
RLIMQ9NVW2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RLIMQ9NVW2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RLIMQ9NVW2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RLIMQ9NVW2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RLIMQ9NVW2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 BICD1-207ENST00000551848 1962 ntBASIC17.64■□□□□ 0.41
RLIMQ9NVW2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RLIMQ9NVW2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms