Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 MESTP1-201ENST00000404287 994 ntBASIC17.84■□□□□ 0.45
KLHL1Q9NR64 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.84■□□□□ 0.45
KLHL1Q9NR64 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHL1Q9NR64 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 AC009237.14-201ENST00000609975 1594 ntBASIC17.83■□□□□ 0.45
KLHL1Q9NR64 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHL1Q9NR64 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 CRYGFP-201ENST00000418459 633 ntBASIC17.83■□□□□ 0.44
KLHL1Q9NR64 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 AC010947.1-201ENST00000623454 693 ntBASIC17.83■□□□□ 0.44
KLHL1Q9NR64 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 HLA-A-209ENST00000638375 975 ntBASIC17.83■□□□□ 0.44
KLHL1Q9NR64 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.83■□□□□ 0.44
KLHL1Q9NR64 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 AC097488.1-201ENST00000507834 756 ntBASIC17.82■□□□□ 0.44
KLHL1Q9NR64 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 AP001271.2-201ENST00000624018 1556 ntBASIC17.82■□□□□ 0.44
KLHL1Q9NR64 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.82■□□□□ 0.44
KLHL1Q9NR64 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL1Q9NR64 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.81■□□□□ 0.44
KLHL1Q9NR64 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL1Q9NR64 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL1Q9NR64 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL1Q9NR64 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
KLHL1Q9NR64 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KLHL1Q9NR64 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
KLHL1Q9NR64 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms