Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NLRC4Q9NPP4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 ESRRAP1-201ENST00000400596 1257 ntBASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 TSPY21P-201ENST00000433481 731 ntBASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NLRC4Q9NPP4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 AC005082.1-201ENST00000413042 2259 ntBASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 AC138932.1-201ENST00000534164 6830 ntBASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NLRC4Q9NPP4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 KRT8P41-201ENST00000533985 1514 ntBASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NLRC4Q9NPP4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.54■□□□□ 0.88
NLRC4Q9NPP4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NLRC4Q9NPP4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms