Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.29■■□□□ 1
KCNMB3Q9NPA1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.29■■□□□ 1
KCNMB3Q9NPA1 AC006333.2-201ENST00000607957 2099 ntBASIC21.28■■□□□ 1
KCNMB3Q9NPA1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 HMGA1P5-201ENST00000412453 271 ntBASIC21.28■■□□□ 1
KCNMB3Q9NPA1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 AC083906.6-201ENST00000641366 219 ntBASIC21.28■■□□□ 1
KCNMB3Q9NPA1 AC068587.9-201ENST00000641814 219 ntBASIC21.28■■□□□ 1
KCNMB3Q9NPA1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
KCNMB3Q9NPA1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 RCC2P3-201ENST00000418112 1537 ntBASIC21.27■■□□□ 1
KCNMB3Q9NPA1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.27■■□□□ 1
KCNMB3Q9NPA1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.27■□□□□ 0.99
KCNMB3Q9NPA1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
KCNMB3Q9NPA1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
KCNMB3Q9NPA1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 AL109659.2-201ENST00000606809 1674 ntBASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 AC113347.1-201ENST00000413321 391 ntBASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 AC073508.3-201ENST00000619697 1419 ntBASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KCNMB3Q9NPA1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 HEIH-201ENST00000623091 1652 ntBASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 KRT8P45-201ENST00000414328 1447 ntBASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 AC010203.1-204ENST00000548782 407 ntBASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 AC005363.2-201ENST00000618631 242 ntBASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms