Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.89■□□□□ 0.77
CD248Q9HCU0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 AC018553.1-201ENST00000616682 1458 ntBASIC19.89■□□□□ 0.77
CD248Q9HCU0 LINC01568-207ENST00000641790 1380 ntBASIC19.89■□□□□ 0.77
CD248Q9HCU0 AL031985.4-201ENST00000642138 673 ntBASIC19.89■□□□□ 0.77
CD248Q9HCU0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CD248Q9HCU0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.89■□□□□ 0.77
CD248Q9HCU0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CD248Q9HCU0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CD248Q9HCU0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 NAPSB-206ENST00000562112 1266 ntBASIC19.88■□□□□ 0.77
CD248Q9HCU0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.88■□□□□ 0.77
CD248Q9HCU0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CD248Q9HCU0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 AC004980.1-204ENST00000429707 299 ntBASIC19.87■□□□□ 0.77
CD248Q9HCU0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 KRT18P35-201ENST00000510488 1269 ntBASIC19.87■□□□□ 0.77
CD248Q9HCU0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CD248Q9HCU0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.87■□□□□ 0.77
CD248Q9HCU0 AC012313.1-201ENST00000593393 3059 ntBASIC19.87■□□□□ 0.77
CD248Q9HCU0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 TERF1P1-201ENST00000311003 1181 ntBASIC19.86■□□□□ 0.77
CD248Q9HCU0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.86■□□□□ 0.77
CD248Q9HCU0 AC011506.1-201ENST00000474329 610 ntBASIC19.86■□□□□ 0.77
CD248Q9HCU0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.86■□□□□ 0.77
CD248Q9HCU0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CD248Q9HCU0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms