Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.45■□□□□ 0.54
CLK4Q9HAZ1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 KSR1P1-201ENST00000446298 240 ntBASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 AC233702.5-201ENST00000584107 538 ntBASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 AC073195.1-201ENST00000607241 877 ntBASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLK4Q9HAZ1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 RPS2P55-201ENST00000397318 883 ntBASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AP002982.1-201ENST00000492365 877 ntBASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AC107956.1-201ENST00000494359 873 ntBASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AC008550.1-201ENST00000511500 884 ntBASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AC018470.1-201ENST00000624790 3129 ntBASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 CROCCP3-202ENST00000420820 1947 ntBASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLK4Q9HAZ1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CLK4Q9HAZ1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms