Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPBQ9H078 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLPBQ9H078 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPBQ9H078 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPBQ9H078 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.06■□□□□ 0.64
CLPBQ9H078 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLPBQ9H078 AP000692.2-201ENST00000608391 879 ntBASIC19.06■□□□□ 0.64
CLPBQ9H078 AC011298.2-201ENST00000617989 482 ntBASIC19.06■□□□□ 0.64
CLPBQ9H078 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPBQ9H078 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPBQ9H078 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPBQ9H078 AC073508.3-201ENST00000619697 1419 ntBASIC19.06■□□□□ 0.64
CLPBQ9H078 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.06■□□□□ 0.64
CLPBQ9H078 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLPBQ9H078 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.06■□□□□ 0.64
CLPBQ9H078 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.06■□□□□ 0.64
CLPBQ9H078 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLPBQ9H078 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.06■□□□□ 0.64
CLPBQ9H078 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLPBQ9H078 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLPBQ9H078 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLPBQ9H078 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
CLPBQ9H078 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.05■□□□□ 0.64
CLPBQ9H078 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.05■□□□□ 0.64
CLPBQ9H078 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.05■□□□□ 0.64
CLPBQ9H078 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.05■□□□□ 0.64
CLPBQ9H078 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLPBQ9H078 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.05■□□□□ 0.64
CLPBQ9H078 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLPBQ9H078 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.05■□□□□ 0.64
CLPBQ9H078 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLPBQ9H078 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLPBQ9H078 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLPBQ9H078 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPBQ9H078 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.04■□□□□ 0.64
CLPBQ9H078 TSPY14P-201ENST00000303979 915 ntBASIC19.04■□□□□ 0.64
CLPBQ9H078 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPBQ9H078 AC004951.3-201ENST00000418645 1148 ntBASIC19.04■□□□□ 0.64
CLPBQ9H078 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLPBQ9H078 AL137013.1-201ENST00000432946 1228 ntBASIC19.04■□□□□ 0.64
CLPBQ9H078 C2orf69P3-201ENST00000565542 1120 ntBASIC19.04■□□□□ 0.64
CLPBQ9H078 SLC25A1P4-201ENST00000567977 778 ntBASIC19.04■□□□□ 0.64
CLPBQ9H078 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CLPBQ9H078 AL445228.2-201ENST00000605589 952 ntBASIC19.04■□□□□ 0.64
CLPBQ9H078 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLPBQ9H078 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPBQ9H078 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.04■□□□□ 0.64
CLPBQ9H078 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPBQ9H078 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CLPBQ9H078 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPBQ9H078 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLPBQ9H078 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CLPBQ9H078 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPBQ9H078 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CLPBQ9H078 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPBQ9H078 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 INGX-201ENST00000359239 846 ntBASIC19.03■□□□□ 0.64
CLPBQ9H078 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPBQ9H078 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPBQ9H078 Z85996.1-201ENST00000494644 937 ntBASIC19.03■□□□□ 0.64
CLPBQ9H078 EGLN1P1-201ENST00000531623 762 ntBASIC19.03■□□□□ 0.64
CLPBQ9H078 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPBQ9H078 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.03■□□□□ 0.64
CLPBQ9H078 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.03■□□□□ 0.64
CLPBQ9H078 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CLPBQ9H078 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLPBQ9H078 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPBQ9H078 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLPBQ9H078 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.02■□□□□ 0.64
CLPBQ9H078 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CLPBQ9H078 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.02■□□□□ 0.64
CLPBQ9H078 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPBQ9H078 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.02■□□□□ 0.64
CLPBQ9H078 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.02■□□□□ 0.64
CLPBQ9H078 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPBQ9H078 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPBQ9H078 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPBQ9H078 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLPBQ9H078 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CLPBQ9H078 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.02■□□□□ 0.64
CLPBQ9H078 ECEL1P2-202ENST00000465689 757 ntBASIC19.02■□□□□ 0.64
CLPBQ9H078 AC091390.4-202ENST00000476426 537 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms