Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
THUMPD3Q9BV44 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 PNMA6B-201ENST00000538162 1200 ntBASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 AC060766.5-201ENST00000590539 871 ntBASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 FEM1AP3-201ENST00000403722 1741 ntBASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THUMPD3Q9BV44 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 PKD1P1-201ENST00000458669 6805 ntBASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 AL121906.2-201ENST00000621597 723 ntBASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 LETM1P2-201ENST00000597330 2178 ntBASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD3Q9BV44 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.1■□□□□ 0.49
THUMPD3Q9BV44 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms