Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2Q9BSQ5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.66■□□□□ 0.58
CCM2Q9BSQ5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2Q9BSQ5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.66■□□□□ 0.58
CCM2Q9BSQ5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2Q9BSQ5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCM2Q9BSQ5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCM2Q9BSQ5 KRT8P9-201ENST00000558927 1449 ntBASIC18.66■□□□□ 0.58
CCM2Q9BSQ5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCM2Q9BSQ5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCM2Q9BSQ5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 SLC25A1P2-201ENST00000430693 912 ntBASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCM2Q9BSQ5 AL049812.1-201ENST00000432563 2267 ntBASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 EGLN1P1-201ENST00000531623 762 ntBASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 KRT8P3-201ENST00000519669 1449 ntBASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 CYP2D8P-201ENST00000433633 1490 ntBASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.63■□□□□ 0.57
CCM2Q9BSQ5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms