Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC6Q99741 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.3■□□□□ 0.52
CDC6Q99741 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC6Q99741 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC6Q99741 DRAXINP1-201ENST00000437611 948 ntBASIC18.3■□□□□ 0.52
CDC6Q99741 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.3■□□□□ 0.52
CDC6Q99741 EMBP1-201ENST00000458200 901 ntBASIC18.3■□□□□ 0.52
CDC6Q99741 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 MIR3180-5-201ENST00000583743 153 ntBASIC18.3■□□□□ 0.52
CDC6Q99741 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.3■□□□□ 0.52
CDC6Q99741 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDC6Q99741 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.29■□□□□ 0.52
CDC6Q99741 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.29■□□□□ 0.52
CDC6Q99741 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.29■□□□□ 0.52
CDC6Q99741 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.29■□□□□ 0.52
CDC6Q99741 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.29■□□□□ 0.52
CDC6Q99741 MIR662-201ENST00000384847 95 ntBASIC18.29■□□□□ 0.52
CDC6Q99741 AL022342.1-201ENST00000400363 863 ntBASIC18.29■□□□□ 0.52
CDC6Q99741 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 MCCD1P1-208ENST00000445732 328 ntBASIC18.29■□□□□ 0.52
CDC6Q99741 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.29■□□□□ 0.52
CDC6Q99741 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CDC6Q99741 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.29■□□□□ 0.52
CDC6Q99741 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.29■□□□□ 0.52
CDC6Q99741 AL136038.4-201ENST00000603606 1261 ntBASIC18.29■□□□□ 0.52
CDC6Q99741 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.29■□□□□ 0.52
CDC6Q99741 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.29■□□□□ 0.52
CDC6Q99741 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDC6Q99741 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDC6Q99741 AC036111.1-201ENST00000533973 1582 ntBASIC18.29■□□□□ 0.52
CDC6Q99741 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CDC6Q99741 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CDC6Q99741 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDC6Q99741 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDC6Q99741 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.28■□□□□ 0.52
CDC6Q99741 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 AL023284.2-201ENST00000405850 579 ntBASIC18.28■□□□□ 0.52
CDC6Q99741 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.28■□□□□ 0.52
CDC6Q99741 AC009078.2-202ENST00000463353 338 ntBASIC18.28■□□□□ 0.52
CDC6Q99741 AP000867.3-201ENST00000524675 377 ntBASIC18.28■□□□□ 0.52
CDC6Q99741 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.28■□□□□ 0.52
CDC6Q99741 AC012615.1-201ENST00000565797 1299 ntBASIC18.28■□□□□ 0.52
CDC6Q99741 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.28■□□□□ 0.52
CDC6Q99741 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.28■□□□□ 0.52
CDC6Q99741 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 AC006538.3-201ENST00000612495 578 ntBASIC18.28■□□□□ 0.52
CDC6Q99741 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.28■□□□□ 0.52
CDC6Q99741 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.28■□□□□ 0.52
CDC6Q99741 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.28■□□□□ 0.52
CDC6Q99741 AC023511.2-201ENST00000618803 211 ntBASIC18.28■□□□□ 0.52
CDC6Q99741 AL031008.1-201ENST00000619963 541 ntBASIC18.28■□□□□ 0.52
CDC6Q99741 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.28■□□□□ 0.52
CDC6Q99741 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDC6Q99741 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDC6Q99741 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.28■□□□□ 0.52
CDC6Q99741 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.28■□□□□ 0.52
CDC6Q99741 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.28■□□□□ 0.52
CDC6Q99741 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDC6Q99741 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.28■□□□□ 0.52
CDC6Q99741 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDC6Q99741 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.27■□□□□ 0.52
CDC6Q99741 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CDC6Q99741 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDC6Q99741 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDC6Q99741 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDC6Q99741 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDC6Q99741 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDC6Q99741 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDC6Q99741 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDC6Q99741 LINC00265-3P-201ENST00000447588 903 ntBASIC18.27■□□□□ 0.52
CDC6Q99741 SEC1P-202ENST00000473944 940 ntBASIC18.27■□□□□ 0.52
CDC6Q99741 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDC6Q99741 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.27■□□□□ 0.52
CDC6Q99741 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms