Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
S1PR3Q99500 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
S1PR3Q99500 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
S1PR3Q99500 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
S1PR3Q99500 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
S1PR3Q99500 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
S1PR3Q99500 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
S1PR3Q99500 AL049812.1-201ENST00000432563 2267 ntBASIC15.66■□□□□ 0.1
S1PR3Q99500 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.66■□□□□ 0.1
S1PR3Q99500 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
S1PR3Q99500 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
S1PR3Q99500 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
S1PR3Q99500 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
S1PR3Q99500 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
S1PR3Q99500 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
S1PR3Q99500 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
S1PR3Q99500 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.65■□□□□ 0.1
S1PR3Q99500 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.65■□□□□ 0.1
S1PR3Q99500 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.65■□□□□ 0.1
S1PR3Q99500 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
S1PR3Q99500 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
S1PR3Q99500 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 KRASP1-201ENST00000407852 552 ntBASIC15.65■□□□□ 0.1
S1PR3Q99500 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.65■□□□□ 0.1
S1PR3Q99500 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.65■□□□□ 0.1
S1PR3Q99500 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
S1PR3Q99500 AL160286.2-201ENST00000567150 934 ntBASIC15.65■□□□□ 0.1
S1PR3Q99500 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
S1PR3Q99500 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 FP475955.4-201ENST00000623131 1990 ntBASIC15.65■□□□□ 0.1
S1PR3Q99500 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.65■□□□□ 0.1
S1PR3Q99500 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
S1PR3Q99500 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
S1PR3Q99500 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
S1PR3Q99500 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.64■□□□□ 0.1
S1PR3Q99500 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.64■□□□□ 0.1
S1PR3Q99500 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.64■□□□□ 0.09
S1PR3Q99500 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 IRX1P1-201ENST00000438849 1838 ntBASIC15.64■□□□□ 0.09
S1PR3Q99500 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.64■□□□□ 0.09
S1PR3Q99500 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
S1PR3Q99500 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.64■□□□□ 0.09
S1PR3Q99500 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.64■□□□□ 0.09
S1PR3Q99500 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.64■□□□□ 0.09
S1PR3Q99500 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 KRT16P5-201ENST00000455284 522 ntBASIC15.64■□□□□ 0.09
S1PR3Q99500 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
S1PR3Q99500 C1QBPP2-201ENST00000528754 825 ntBASIC15.64■□□□□ 0.09
S1PR3Q99500 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 AC006333.2-201ENST00000607957 2099 ntBASIC15.64■□□□□ 0.09
S1PR3Q99500 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.64■□□□□ 0.09
S1PR3Q99500 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
S1PR3Q99500 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.64■□□□□ 0.09
S1PR3Q99500 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
S1PR3Q99500 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
S1PR3Q99500 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
S1PR3Q99500 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
S1PR3Q99500 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
S1PR3Q99500 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
S1PR3Q99500 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
S1PR3Q99500 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
S1PR3Q99500 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
S1PR3Q99500 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
S1PR3Q99500 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms