Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASD1Q96PB1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.24■□□□□ 0.83
CASD1Q96PB1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 AL391807.1-203ENST00000604392 2365 ntBASIC20.23■□□□□ 0.83
CASD1Q96PB1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 AL109659.2-201ENST00000606809 1674 ntBASIC20.23■□□□□ 0.83
CASD1Q96PB1 AL512353.2-201ENST00000448759 1962 ntBASIC20.23■□□□□ 0.83
CASD1Q96PB1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASD1Q96PB1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CASD1Q96PB1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 RCC2P3-201ENST00000418112 1537 ntBASIC20.22■□□□□ 0.83
CASD1Q96PB1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 LINC01521-201ENST00000504184 1943 ntBASIC20.22■□□□□ 0.83
CASD1Q96PB1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 MIR3652-201ENST00000579335 131 ntBASIC20.22■□□□□ 0.83
CASD1Q96PB1 AL136038.4-201ENST00000603606 1261 ntBASIC20.22■□□□□ 0.83
CASD1Q96PB1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.22■□□□□ 0.83
CASD1Q96PB1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 AC125437.2-201ENST00000625180 2167 ntBASIC20.22■□□□□ 0.83
CASD1Q96PB1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 AC008556.1-201ENST00000610908 2040 ntBASIC20.22■□□□□ 0.83
CASD1Q96PB1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASD1Q96PB1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 MIR662-201ENST00000384847 95 ntBASIC20.21■□□□□ 0.83
CASD1Q96PB1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 AL691432.3-201ENST00000621860 400 ntBASIC20.21■□□□□ 0.83
CASD1Q96PB1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASD1Q96PB1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CASD1Q96PB1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CASD1Q96PB1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms