Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 DUX4L16-201ENST00000555130 1264 ntBASIC14.49□□□□□ -0.09
LINC00479Q96M42 AC069236.1-201ENST00000604339 616 ntBASIC14.49□□□□□ -0.09
LINC00479Q96M42 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00479Q96M42 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LINC00479Q96M42 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 CYP2T1P-201ENST00000432607 1285 ntBASIC14.48□□□□□ -0.09
LINC00479Q96M42 KRT18P11-201ENST00000435214 1283 ntBASIC14.48□□□□□ -0.09
LINC00479Q96M42 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 AC008694.1-202ENST00000636953 945 ntBASIC14.48□□□□□ -0.09
LINC00479Q96M42 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 AC010980.2-201ENST00000587099 1412 ntBASIC14.48□□□□□ -0.09
LINC00479Q96M42 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00479Q96M42 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00479Q96M42 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 AC011767.1-201ENST00000617410 1153 ntBASIC14.47□□□□□ -0.09
LINC00479Q96M42 AC083906.6-201ENST00000641366 219 ntBASIC14.47□□□□□ -0.09
LINC00479Q96M42 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.47□□□□□ -0.09
LINC00479Q96M42 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC00479Q96M42 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC00479Q96M42 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC00479Q96M42 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms