Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 AC018445.3-201ENST00000624177 1945 ntBASIC18.26■□□□□ 0.51
RNF31Q96EP0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF31Q96EP0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF31Q96EP0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF31Q96EP0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 AC009237.14-201ENST00000609975 1594 ntBASIC18.25■□□□□ 0.51
RNF31Q96EP0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF31Q96EP0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 HMGA1P5-201ENST00000412453 271 ntBASIC18.24■□□□□ 0.51
RNF31Q96EP0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 CCR12P-201ENST00000446203 998 ntBASIC18.24■□□□□ 0.51
RNF31Q96EP0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 AC022616.7-201ENST00000525383 220 ntBASIC18.24■□□□□ 0.51
RNF31Q96EP0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF31Q96EP0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF31Q96EP0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF31Q96EP0 KRT8P11-201ENST00000409686 1436 ntBASIC18.23■□□□□ 0.51
RNF31Q96EP0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF31Q96EP0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RNF31Q96EP0 SDHAP1-207ENST00000440850 2000 ntBASIC18.23■□□□□ 0.51
RNF31Q96EP0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF31Q96EP0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF31Q96EP0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF31Q96EP0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF31Q96EP0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF31Q96EP0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF31Q96EP0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF31Q96EP0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF31Q96EP0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.23■□□□□ 0.51
RNF31Q96EP0 YBX1P2-201ENST00000489612 999 ntBASIC18.23■□□□□ 0.51
RNF31Q96EP0 AP003041.3-201ENST00000527151 707 ntBASIC18.23■□□□□ 0.51
RNF31Q96EP0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF31Q96EP0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RNF31Q96EP0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms