Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 KRT8P45-201ENST00000414328 1447 ntBASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ECHDC3Q96DC8 AL049812.1-201ENST00000432563 2267 ntBASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 WWOX-216ENST00000569818 525 ntBASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 RN7SL850P-201ENST00000579959 291 ntBASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ECHDC3Q96DC8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 LIN28AP1-201ENST00000429574 405 ntBASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 KRT18P57-201ENST00000443599 1254 ntBASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 KRT18P21-201ENST00000515767 1272 ntBASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 AL109659.2-201ENST00000606809 1674 ntBASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ECHDC3Q96DC8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 CR769767.2-201ENST00000622735 460 ntBASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ECHDC3Q96DC8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms