Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF25Q96BH1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF25Q96BH1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 ESRRAP1-201ENST00000400596 1257 ntBASIC19.92■□□□□ 0.78
RNF25Q96BH1 KRASP1-201ENST00000407852 552 ntBASIC19.92■□□□□ 0.78
RNF25Q96BH1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 AL160286.2-201ENST00000567150 934 ntBASIC19.92■□□□□ 0.78
RNF25Q96BH1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF25Q96BH1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF25Q96BH1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF25Q96BH1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF25Q96BH1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF25Q96BH1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF25Q96BH1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF25Q96BH1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF25Q96BH1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF25Q96BH1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RNF25Q96BH1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF25Q96BH1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF25Q96BH1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
RNF25Q96BH1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF25Q96BH1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF25Q96BH1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RNF25Q96BH1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF25Q96BH1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF25Q96BH1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF25Q96BH1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms