Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC23.37■■□□□ 1.33
RPGRQ92834 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPGRQ92834 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RPGRQ92834 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RPGRQ92834 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPGRQ92834 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPGRQ92834 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RPGRQ92834 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.36■■□□□ 1.33
RPGRQ92834 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.36■■□□□ 1.33
RPGRQ92834 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 NUS1P1-201ENST00000446295 882 ntBASIC23.36■■□□□ 1.33
RPGRQ92834 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.36■■□□□ 1.33
RPGRQ92834 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.36■■□□□ 1.33
RPGRQ92834 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.36■■□□□ 1.33
RPGRQ92834 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
RPGRQ92834 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPGRQ92834 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPGRQ92834 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPGRQ92834 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPGRQ92834 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPGRQ92834 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPGRQ92834 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.35■■□□□ 1.33
RPGRQ92834 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.35■■□□□ 1.33
RPGRQ92834 MIR662-201ENST00000384847 95 ntBASIC23.35■■□□□ 1.33
RPGRQ92834 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.35■■□□□ 1.33
RPGRQ92834 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.35■■□□□ 1.33
RPGRQ92834 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC23.35■■□□□ 1.33
RPGRQ92834 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC23.35■■□□□ 1.33
RPGRQ92834 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RPGRQ92834 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC23.35■■□□□ 1.33
RPGRQ92834 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPGRQ92834 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.35■■□□□ 1.33
RPGRQ92834 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPGRQ92834 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.35■■□□□ 1.33
RPGRQ92834 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPGRQ92834 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RPGRQ92834 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPGRQ92834 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPGRQ92834 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.34■■□□□ 1.33
RPGRQ92834 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.34■■□□□ 1.33
RPGRQ92834 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPGRQ92834 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.34■■□□□ 1.33
RPGRQ92834 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC23.34■■□□□ 1.33
RPGRQ92834 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.34■■□□□ 1.33
RPGRQ92834 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPGRQ92834 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RPGRQ92834 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
RPGRQ92834 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.33■■□□□ 1.33
RPGRQ92834 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
RPGRQ92834 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
RPGRQ92834 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RPGRQ92834 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC23.33■■□□□ 1.33
RPGRQ92834 KRT17P6-201ENST00000453795 1220 ntBASIC23.33■■□□□ 1.33
RPGRQ92834 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.33■■□□□ 1.33
RPGRQ92834 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.33■■□□□ 1.33
RPGRQ92834 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.33■■□□□ 1.33
RPGRQ92834 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.33■■□□□ 1.33
RPGRQ92834 IFNL4P1-201ENST00000607083 540 ntBASIC23.33■■□□□ 1.33
RPGRQ92834 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RPGRQ92834 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RPGRQ92834 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RPGRQ92834 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RPGRQ92834 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
RPGRQ92834 KRT8P10-201ENST00000450021 1447 ntBASIC23.33■■□□□ 1.32
RPGRQ92834 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPGRQ92834 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
RPGRQ92834 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPGRQ92834 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RPGRQ92834 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPGRQ92834 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPGRQ92834 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.32■■□□□ 1.32
RPGRQ92834 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RPGRQ92834 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPGRQ92834 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC23.32■■□□□ 1.32
RPGRQ92834 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.32■■□□□ 1.32
RPGRQ92834 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.32■■□□□ 1.32
RPGRQ92834 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.32■■□□□ 1.32
RPGRQ92834 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms