Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB40AQ8WXH6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40AQ8WXH6 FP475955.4-201ENST00000623131 1990 ntBASIC16.68■□□□□ 0.26
RAB40AQ8WXH6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 AC005829.2-201ENST00000571422 1056 ntBASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 AL512353.2-201ENST00000448759 1962 ntBASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40AQ8WXH6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 ZNF815P-204ENST00000434898 1737 ntBASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 AC023632.3-201ENST00000521633 145 ntBASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40AQ8WXH6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 IRX1P1-201ENST00000438849 1838 ntBASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms