Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 FZD10-202ENST00000539839 3282 ntBASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.91■□□□□ 0.62
RAB3IL1Q8TBN0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 GPX1P1-201ENST00000388829 606 ntBASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 AL512625.2-201ENST00000417533 625 ntBASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 AC137761.2-201ENST00000561729 223 ntBASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 AC145350.3-201ENST00000569033 163 ntBASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 KRT8P8-201ENST00000434750 1448 ntBASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAB3IL1Q8TBN0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.89■□□□□ 0.62
RAB3IL1Q8TBN0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 AC004911.1-201ENST00000416316 871 ntBASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 AC090192.1-201ENST00000517740 490 ntBASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 ABALON-201ENST00000629058 1903 ntBASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 LTB4R2-202ENST00000528054 3092 ntBASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAB3IL1Q8TBN0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 PCDHB18P-201ENST00000524813 2368 ntBASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB3IL1Q8TBN0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms