Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.34■□□□□ 0.37
CNIH3Q8TBE1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.34■□□□□ 0.37
CNIH3Q8TBE1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.34■□□□□ 0.37
CNIH3Q8TBE1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.34■□□□□ 0.37
CNIH3Q8TBE1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNIH3Q8TBE1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CNIH3Q8TBE1 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.34■□□□□ 0.37
CNIH3Q8TBE1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 AL162741.1-201ENST00000565563 1558 ntBASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNIH3Q8TBE1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CNIH3Q8TBE1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 AC134043.2-201ENST00000624206 2238 ntBASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNIH3Q8TBE1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.31■□□□□ 0.36
CNIH3Q8TBE1 PRORSD1P-202ENST00000563365 2154 ntBASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNIH3Q8TBE1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms