Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 PCED1CP-201ENST00000419887 785 ntBASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 TSPY23P-201ENST00000440136 739 ntBASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
SHKBP1Q8TBC3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHKBP1Q8TBC3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 SDHAP1-207ENST00000440850 2000 ntBASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 AP000523.1-201ENST00000398242 1049 ntBASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 NEK4P2-201ENST00000580004 1012 ntBASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 AC125437.2-201ENST00000625180 2167 ntBASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHKBP1Q8TBC3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 IER3-202ENST00000376377 1350 ntBASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.87■□□□□ 0.77
SHKBP1Q8TBC3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms