Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SPTSSBQ8NFR3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 LBX2-AS1-202ENST00000603175 2083 ntBASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 AC022413.1-201ENST00000624602 984 ntBASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 AL138781.2-201ENST00000617896 1843 ntBASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
SPTSSBQ8NFR3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 HYI-210ENST00000486909 905 ntTSL 5 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 CR559946.2-201ENST00000623684 991 ntBASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SPTSSBQ8NFR3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms