Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS37AQ8NEZ2 AC092666.2-201ENST00000613287 246 ntBASIC18.09■□□□□ 0.49
VPS37AQ8NEZ2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS37AQ8NEZ2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
VPS37AQ8NEZ2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.09■□□□□ 0.49
VPS37AQ8NEZ2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS37AQ8NEZ2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VPS37AQ8NEZ2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.09■□□□□ 0.49
VPS37AQ8NEZ2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
VPS37AQ8NEZ2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VPS37AQ8NEZ2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 KRT17P3-201ENST00000420566 1262 ntBASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.07■□□□□ 0.48
VPS37AQ8NEZ2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 AL512353.2-201ENST00000448759 1962 ntBASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VPS37AQ8NEZ2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms